Carnation DB

Dca8357.1

Annotation

14-exons
f-1
sp|D7MA49_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_491484#GO:0003755;GO:0006457#1F1P0C
AT4G32420.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr4:15647550-15652103 REVERSE LENGTH=837
Repeat List (scaffold135)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8357.1	1	493	706	32.57	493	43	3e-88
Target_name	Start	End	Length	Cov(%)
sp\|D7MA49_ARALL	1	525	845	62.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8357.1	252	459	706	13.17	208	36	2e-13
Target_name	Start	End	Length	Cov(%)
AT4G32420.1	259	507	837	29.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold135	Augustus	mRNA	246950	255131	.	+	.	ID=Dca8357.1;Parent=Dca8357
scaffold135	Augustus	exon	246950	247027	.	+	.	ID=Dca8357.1.exon1;Parent=Dca8357.1
scaffold135	Augus-PASA	exon	247120	247174	.	+	.	ID=Dca8357.1.exon2;Parent=Dca8357.1
scaffold135	Augus-PASA	exon	248635	248723	.	+	.	ID=Dca8357.1.exon3;Parent=Dca8357.1
scaffold135	Augus-PASA	exon	249047	249071	.	+	.	ID=Dca8357.1.exon4;Parent=Dca8357.1
scaffold135	Augus-PASA	exon	249497	249535	.	+	.	ID=Dca8357.1.exon5;Parent=Dca8357.1
scaffold135	Augus-PASA	exon	250546	250663	.	+	.	ID=Dca8357.1.exon6;Parent=Dca8357.1
scaffold135	Augus-PASA	exon	250877	251007	.	+	.	ID=Dca8357.1.exon7;Parent=Dca8357.1
scaffold135	Augustus	exon	251166	251463	.	+	.	ID=Dca8357.1.exon8;Parent=Dca8357.1
scaffold135	Augustus	exon	251900	252015	.	+	.	ID=Dca8357.1.exon9;Parent=Dca8357.1
scaffold135	Augustus	exon	252794	253001	.	+	.	ID=Dca8357.1.exon10;Parent=Dca8357.1
scaffold135	Augustus	exon	253089	253426	.	+	.	ID=Dca8357.1.exon11;Parent=Dca8357.1
scaffold135	Augustus	exon	253509	253817	.	+	.	ID=Dca8357.1.exon12;Parent=Dca8357.1
scaffold135	Augustus	exon	253924	253971	.	+	.	ID=Dca8357.1.exon13;Parent=Dca8357.1
scaffold135	Augustus	exon	254863	255131	.	+	.	ID=Dca8357.1.exon14;Parent=Dca8357.1