Carnation DB

Dca8368.1

Annotation

8-exons
f-1
sp|F6HMS9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g00440#GO:0008270#1F0P0C
AT5G01960.1 | Symbols: | RING/U-box superfamily protein | chr5:370811-372775 FORWARD LENGTH=426
Repeat List (scaffold1350)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8368.1	1	477	477	71.9	477	71	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HMS9_VITVI	1	462	462	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8368.1	1	477	477	65.4	477	66	9e-176
Target_name	Start	End	Length	Cov(%)
AT5G01960.1	1	426	426	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1350	Augustus	mRNA	14470	20254	.	-	.	ID=Dca8368.1;Parent=Dca8368
scaffold1350	Augustus	exon	14470	14575	.	-	.	ID=Dca8368.1.exon1;Parent=Dca8368.1
scaffold1350	Augustus	exon	15598	15701	.	-	.	ID=Dca8368.1.exon2;Parent=Dca8368.1
scaffold1350	Augustus	exon	16064	16141	.	-	.	ID=Dca8368.1.exon3;Parent=Dca8368.1
scaffold1350	Augustus	exon	16235	16399	.	-	.	ID=Dca8368.1.exon4;Parent=Dca8368.1
scaffold1350	Augustus	exon	16489	16577	.	-	.	ID=Dca8368.1.exon5;Parent=Dca8368.1
scaffold1350	Augustus	exon	18460	18628	.	-	.	ID=Dca8368.1.exon6;Parent=Dca8368.1
scaffold1350	Augustus	exon	18729	18805	.	-	.	ID=Dca8368.1.exon7;Parent=Dca8368.1
scaffold1350	Augustus	exon	19609	20254	.	-	.	ID=Dca8368.1.exon8;Parent=Dca8368.1