Dca8398.1
Annotation
- 3-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q0WPN1_ARATH#Putative reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At1g10160#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1352)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8398.1 |
69 |
212 |
225 |
24 |
144 |
38 |
6e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
86 |
230 |
1114 |
13.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8398.1 |
94 |
210 |
225 |
18.22 |
117 |
34 |
2e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G40390.1 |
95 |
216 |
426 |
28.63 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1352 |
Augustus |
mRNA |
30830 |
32045 |
. |
- |
. |
ID=Dca8398.1;Parent=Dca8398 |
| scaffold1352 |
Augustus |
exon |
30830 |
30871 |
. |
- |
. |
ID=Dca8398.1.exon1;Parent=Dca8398.1 |
| scaffold1352 |
Augustus |
exon |
30973 |
31392 |
. |
- |
. |
ID=Dca8398.1.exon2;Parent=Dca8398.1 |
| scaffold1352 |
Augustus |
exon |
31830 |
32045 |
. |
- |
. |
ID=Dca8398.1.exon3;Parent=Dca8398.1 |
