Dca842.1
Annotation
- 3-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|B2BXY8_9BRAS#Non-LTR retrotransposon transposase#Arabidopsis cebennensis#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold1021)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca842.1 |
244 |
397 |
448 |
13.39 |
154 |
39 |
2e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
671 |
824 |
1365 |
11.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca842.1 |
250 |
394 |
448 |
10.26 |
145 |
32 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
583 |
728 |
857 |
17.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1021 |
Augustus |
mRNA |
34120 |
38245 |
. |
+ |
. |
ID=Dca842.1;Parent=Dca842 |
| scaffold1021 |
Augustus |
exon |
34120 |
34854 |
. |
+ |
. |
ID=Dca842.1.exon1;Parent=Dca842.1 |
| scaffold1021 |
Augustus |
exon |
36136 |
36591 |
. |
+ |
. |
ID=Dca842.1.exon2;Parent=Dca842.1 |
| scaffold1021 |
Augustus |
exon |
38090 |
38245 |
. |
+ |
. |
ID=Dca842.1.exon3;Parent=Dca842.1 |
