Dca8430.1
Annotation
- 3-exons
- f-1
- sp|A5B1P9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_012360#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- ATMG00820.1 | Symbols: ORF170 | Reverse transcriptase (RNA-dependent DNA polymerase) | chrM:228573-229085 REVERSE LENGTH=170
- Repeat List (scaffold1354)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8430.1 |
172 |
319 |
321 |
29.59 |
148 |
65 |
2e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B1P9_VITVI |
941 |
1088 |
1409 |
10.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8430.1 |
215 |
313 |
321 |
14.64 |
99 |
48 |
6e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00820.1 |
27 |
125 |
170 |
58.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1354 |
Augustus |
mRNA |
37636 |
41185 |
. |
- |
. |
ID=Dca8430.1;Parent=Dca8430 |
| scaffold1354 |
Augustus |
exon |
37636 |
38294 |
. |
- |
. |
ID=Dca8430.1.exon1;Parent=Dca8430.1 |
| scaffold1354 |
Augustus |
exon |
39614 |
39746 |
. |
- |
. |
ID=Dca8430.1.exon2;Parent=Dca8430.1 |
| scaffold1354 |
Augustus |
exon |
41012 |
41185 |
. |
- |
. |
ID=Dca8430.1.exon3;Parent=Dca8430.1 |
