Dca8440.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold13548)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8440.1 |
61 |
786 |
797 |
43.03 |
726 |
46 |
7e-169
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
11 |
701 |
1717 |
40.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8440.1 |
610 |
684 |
797 |
3.63 |
75 |
39 |
4e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0122300-01 |
77 |
150 |
150 |
49.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13548 |
Augustus |
mRNA |
1175 |
4570 |
. |
+ |
. |
ID=Dca8440.1;Parent=Dca8440 |
| scaffold13548 |
Augustus |
exon |
1175 |
3245 |
. |
+ |
. |
ID=Dca8440.1.exon1;Parent=Dca8440.1 |
| scaffold13548 |
Augustus |
exon |
3314 |
3601 |
. |
+ |
. |
ID=Dca8440.1.exon2;Parent=Dca8440.1 |
| scaffold13548 |
Augustus |
exon |
4536 |
4570 |
. |
+ |
. |
ID=Dca8440.1.exon3;Parent=Dca8440.1 |
