Carnation DB

Dca8499.1

Annotation

8-exons
f-1
sp|F6I0C5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0044g01700#unknown#0F0P0C
sp|B9SEL3_RICCO#Transcription initiation factor ia, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0970060#GO:0003743#1F0P0C
Repeat List (scaffold13585)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8499.1	9	299	299	54.18	291	56	2e-79
Target_name	Start	End	Length	Cov(%)
sp\|F6I0C5_VITVI	17	293	627	44.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8499.1	11	256	299	37.45	246	46	3e-51
Target_name	Start	End	Length	Cov(%)
AT2G34750.1	24	261	613	38.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13585	Augustus	mRNA	1	3597	.	-	.	ID=Dca8499.1;Parent=Dca8499
scaffold13585	Augustus	exon	1	86	.	-	.	ID=Dca8499.1.exon1;Parent=Dca8499.1
scaffold13585	Augustus	exon	198	314	.	-	.	ID=Dca8499.1.exon2;Parent=Dca8499.1
scaffold13585	Augustus	exon	573	686	.	-	.	ID=Dca8499.1.exon3;Parent=Dca8499.1
scaffold13585	Augustus	exon	1493	1738	.	-	.	ID=Dca8499.1.exon4;Parent=Dca8499.1
scaffold13585	Augustus	exon	1843	1914	.	-	.	ID=Dca8499.1.exon5;Parent=Dca8499.1
scaffold13585	Augustus	exon	2511	2600	.	-	.	ID=Dca8499.1.exon6;Parent=Dca8499.1
scaffold13585	Augustus	exon	2684	2767	.	-	.	ID=Dca8499.1.exon7;Parent=Dca8499.1
scaffold13585	Augustus	exon	3508	3597	.	-	.	ID=Dca8499.1.exon8;Parent=Dca8499.1