Carnation DB

Dca8503.1

Annotation

8-exons
f-1
sp|A9PF62_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0004553;GO:0005975#1F1P0C
AT5G04885.1 | Symbols: | Glycosyl hydrolase family protein | chr5:1423369-1426628 FORWARD LENGTH=665
Repeat List (scaffold1359)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8503.1	6	653	667	63.56	648	66	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PF62_POPTR	8	621	626	98.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8503.1	6	662	667	61.91	657	63	0
Target_name	Start	End	Length	Cov(%)
AT5G04885.1	12	633	665	93.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1359	Augustus	mRNA	13305	15968	.	-	.	ID=Dca8503.1;Parent=Dca8503
scaffold1359	Augustus	exon	13305	13819	.	-	.	ID=Dca8503.1.exon1;Parent=Dca8503.1
scaffold1359	Augustus	exon	13916	14120	.	-	.	ID=Dca8503.1.exon2;Parent=Dca8503.1
scaffold1359	Augustus	exon	14204	14587	.	-	.	ID=Dca8503.1.exon3;Parent=Dca8503.1
scaffold1359	Augus-PASA	exon	14682	14925	.	-	.	ID=Dca8503.1.exon4;Parent=Dca8503.1
scaffold1359	Augus-PASA	exon	15016	15161	.	-	.	ID=Dca8503.1.exon5;Parent=Dca8503.1
scaffold1359	Augus-PASA	exon	15254	15344	.	-	.	ID=Dca8503.1.exon6;Parent=Dca8503.1
scaffold1359	Augus-PASA	exon	15444	15645	.	-	.	ID=Dca8503.1.exon7;Parent=Dca8503.1
scaffold1359	Augus-PASA	exon	15752	15968	.	-	.	ID=Dca8503.1.exon8;Parent=Dca8503.1