Carnation DB

Dca8506.1

Annotation

5-exons
f-1
sp|D7TV41_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g00100#GO:0030131;GO:0005488;GO:0008565;GO:0006886;GO:0016192#2F2P1C
Os03t0355600-01 Similar to Adapter-related protein complex 2 beta 1 subunit (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) (Fragment).
Repeat List (scaffold1359)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8506.1	114	217	217	38.7	104	57	3e-36
Target_name	Start	End	Length	Cov(%)
sp\|D7TV41_VITVI	650	795	920	15.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8506.1	76	217	217	40.09	142	44	2e-35
Target_name	Start	End	Length	Cov(%)
Os03t0355600-01	591	786	894	21.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1359	Augustus	mRNA	40662	43080	.	+	.	ID=Dca8506.1;Parent=Dca8506
scaffold1359	Augustus	exon	40662	40824	.	+	.	ID=Dca8506.1.exon1;Parent=Dca8506.1
scaffold1359	Augustus	exon	41417	41502	.	+	.	ID=Dca8506.1.exon2;Parent=Dca8506.1
scaffold1359	Augustus	exon	42167	42330	.	+	.	ID=Dca8506.1.exon3;Parent=Dca8506.1
scaffold1359	Augustus	exon	42616	42676	.	+	.	ID=Dca8506.1.exon4;Parent=Dca8506.1
scaffold1359	Augustus	exon	42901	43080	.	+	.	ID=Dca8506.1.exon5;Parent=Dca8506.1