Carnation DB

Dca8644.1

Annotation

7-exons
f-1
sp|B9GY13_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830715#GO:0003677;GO:0008270#2F0P0C
AT1G30970.1 | Symbols: SUF4 | zinc finger (C2H2 type) family protein | chr1:11040613-11043593 REVERSE LENGTH=367
Repeat List (scaffold1367)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8644.1	1	365	365	67.39	365	63	1e-117
Target_name	Start	End	Length	Cov(%)
sp\|B9GY13_POPTR	1	385	385	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8644.1	1	365	365	65.75	365	62	1e-109
Target_name	Start	End	Length	Cov(%)
AT1G30970.1	1	367	367	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1367	Augustus	mRNA	38883	43701	.	-	.	ID=Dca8644.1;Parent=Dca8644
scaffold1367	Augustus	exon	38883	38954	.	-	.	ID=Dca8644.1.exon1;Parent=Dca8644.1
scaffold1367	Augustus	exon	39599	39652	.	-	.	ID=Dca8644.1.exon2;Parent=Dca8644.1
scaffold1367	Augustus	exon	40349	40503	.	-	.	ID=Dca8644.1.exon3;Parent=Dca8644.1
scaffold1367	Augustus	exon	40911	41311	.	-	.	ID=Dca8644.1.exon4;Parent=Dca8644.1
scaffold1367	Augustus	exon	41410	41533	.	-	.	ID=Dca8644.1.exon5;Parent=Dca8644.1
scaffold1367	Augustus	exon	43284	43381	.	-	.	ID=Dca8644.1.exon6;Parent=Dca8644.1
scaffold1367	Augustus	exon	43508	43701	.	-	.	ID=Dca8644.1.exon7;Parent=Dca8644.1