Carnation DB

Dca872.1

Annotation

5-exons
f-1
sp|B9T070_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0768760#GO:0031072;GO:0051082#2F0P0C
Os08t0463900-01 Heat shock protein DnaJ, cysteine-rich region domain containing protein.
Repeat List (scaffold1022)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca872.1	13	182	182	63.18	170	65	9e-58
Target_name	Start	End	Length	Cov(%)
sp\|B9T070_RICCO	19	189	189	90.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca872.1	53	182	182	50.54	130	71	1e-48
Target_name	Start	End	Length	Cov(%)
Os08t0463900-01	58	187	188	69.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1022	Augus-PASA	mRNA	81946	83070	.	+	.	ID=Dca872.1;Parent=Dca872
scaffold1022	Augus-PASA	exon	81946	82000	.	+	.	ID=Dca872.1.exon1;Parent=Dca872.1
scaffold1022	Augus-PASA	exon	82227	82330	.	+	.	ID=Dca872.1.exon2;Parent=Dca872.1
scaffold1022	Augus-PASA	exon	82459	82624	.	+	.	ID=Dca872.1.exon3;Parent=Dca872.1
scaffold1022	Augus-PASA	exon	82748	82840	.	+	.	ID=Dca872.1.exon4;Parent=Dca872.1
scaffold1022	Augustus	exon	82940	83070	.	+	.	ID=Dca872.1.exon5;Parent=Dca872.1