Dca8790.1
Annotation
- 3-exons
- f-1
- sp|A5BCC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040650#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1375)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8790.1 |
738 |
799 |
869 |
3.33 |
62 |
47 |
3e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BCC7_VITVI |
1249 |
1310 |
1316 |
4.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8790.1 |
739 |
784 |
869 |
2.53 |
46 |
48 |
6e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1333 |
1378 |
1401 |
3.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1375 |
Augustus |
mRNA |
10959 |
14085 |
. |
+ |
. |
ID=Dca8790.1;Parent=Dca8790 |
| scaffold1375 |
Augustus |
exon |
10959 |
12773 |
. |
+ |
. |
ID=Dca8790.1.exon1;Parent=Dca8790.1 |
| scaffold1375 |
Augustus |
exon |
13097 |
13469 |
. |
+ |
. |
ID=Dca8790.1.exon2;Parent=Dca8790.1 |
| scaffold1375 |
Augustus |
exon |
13664 |
14085 |
. |
+ |
. |
ID=Dca8790.1.exon3;Parent=Dca8790.1 |
