Carnation DB

Dca88.1

Annotation

13-exons
f-1
sp|D7U7I5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g02010#GO:0005524;GO:0004674#2F0P0C
AT4G00720.1 | Symbols: ATSK32, ASKTHETA, SK32 | shaggy-like protein kinase 32 | chr4:294116-297002 REVERSE LENGTH=472
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca88.1	1	468	468	77.99	468	78	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U7I5_VITVI	1	467	468	99.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca88.1	1	466	468	73.29	466	74	0
Target_name	Start	End	Length	Cov(%)
AT4G00720.1	1	464	472	98.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augustus	mRNA	803151	808380	.	+	.	ID=Dca88.1;Parent=Dca88
scaffold1	Augustus	exon	803151	803210	.	+	.	ID=Dca88.1.exon1;Parent=Dca88.1
scaffold1	Augustus	exon	805599	805853	.	+	.	ID=Dca88.1.exon2;Parent=Dca88.1
scaffold1	Augustus	exon	806055	806147	.	+	.	ID=Dca88.1.exon3;Parent=Dca88.1
scaffold1	Augustus	exon	806360	806419	.	+	.	ID=Dca88.1.exon4;Parent=Dca88.1
scaffold1	Augustus	exon	806529	806801	.	+	.	ID=Dca88.1.exon5;Parent=Dca88.1
scaffold1	Augus-PASA	exon	806889	806963	.	+	.	ID=Dca88.1.exon6;Parent=Dca88.1
scaffold1	Augus-PASA	exon	807095	807151	.	+	.	ID=Dca88.1.exon7;Parent=Dca88.1
scaffold1	Augus-PASA	exon	807272	807412	.	+	.	ID=Dca88.1.exon8;Parent=Dca88.1
scaffold1	Augus-PASA	exon	807553	807603	.	+	.	ID=Dca88.1.exon9;Parent=Dca88.1
scaffold1	Augus-PASA	exon	807718	807813	.	+	.	ID=Dca88.1.exon10;Parent=Dca88.1
scaffold1	Augus-PASA	exon	807910	807993	.	+	.	ID=Dca88.1.exon11;Parent=Dca88.1
scaffold1	Augus-PASA	exon	808099	808201	.	+	.	ID=Dca88.1.exon12;Parent=Dca88.1
scaffold1	Augus-PASA	exon	808322	808380	.	+	.	ID=Dca88.1.exon13;Parent=Dca88.1