Carnation DB

Dca8868.1

Annotation

16-exons
f-1
sp|D7SU98_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g03330#unknown#0F0P0C
AT4G32910.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:15881364-15885210 FORWARD LENGTH=716
Repeat List (scaffold1379)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8868.1	22	581	582	69.93	560	70	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SU98_VITVI	128	715	715	82.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8868.1	9	581	582	63.23	573	61	0
Target_name	Start	End	Length	Cov(%)
AT4G32910.1	112	715	716	84.35

seqname	source	feature	start	end	score	strand	frame	group
scaffold1379	Augustus	mRNA	31191	35985	.	+	.	ID=Dca8868.1;Parent=Dca8868
scaffold1379	Augustus	exon	31191	31352	.	+	.	ID=Dca8868.1.exon1;Parent=Dca8868.1
scaffold1379	Augustus	exon	31474	31584	.	+	.	ID=Dca8868.1.exon2;Parent=Dca8868.1
scaffold1379	Augustus	exon	31903	31974	.	+	.	ID=Dca8868.1.exon3;Parent=Dca8868.1
scaffold1379	Augustus	exon	32060	32116	.	+	.	ID=Dca8868.1.exon4;Parent=Dca8868.1
scaffold1379	Augustus	exon	32586	32705	.	+	.	ID=Dca8868.1.exon5;Parent=Dca8868.1
scaffold1379	Augustus	exon	32798	32998	.	+	.	ID=Dca8868.1.exon6;Parent=Dca8868.1
scaffold1379	Augustus	exon	33097	33207	.	+	.	ID=Dca8868.1.exon7;Parent=Dca8868.1
scaffold1379	Augustus	exon	33309	33346	.	+	.	ID=Dca8868.1.exon8;Parent=Dca8868.1
scaffold1379	Augustus	exon	33799	33955	.	+	.	ID=Dca8868.1.exon9;Parent=Dca8868.1
scaffold1379	Augustus	exon	34307	34408	.	+	.	ID=Dca8868.1.exon10;Parent=Dca8868.1
scaffold1379	Augustus	exon	34503	34559	.	+	.	ID=Dca8868.1.exon11;Parent=Dca8868.1
scaffold1379	Augustus	exon	34671	34817	.	+	.	ID=Dca8868.1.exon12;Parent=Dca8868.1
scaffold1379	Augus-PASA	exon	34910	34980	.	+	.	ID=Dca8868.1.exon13;Parent=Dca8868.1
scaffold1379	Augus-PASA	exon	35388	35475	.	+	.	ID=Dca8868.1.exon14;Parent=Dca8868.1
scaffold1379	Augus-PASA	exon	35614	35670	.	+	.	ID=Dca8868.1.exon15;Parent=Dca8868.1
scaffold1379	Augustus	exon	35788	35985	.	+	.	ID=Dca8868.1.exon16;Parent=Dca8868.1