Dca8889.1
Annotation
- 3-exons
- f-1
- sp|B9RV78_RICCO#AMP-activated protein kinase, gamma regulatory subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0900640#GO:0016301#1F0P0C
- Repeat List (scaffold138)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8889.1 |
5 |
362 |
364 |
64.28 |
358 |
65 |
5e-126
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RV78_RICCO |
39 |
398 |
403 |
89.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8889.1 |
12 |
360 |
364 |
53.84 |
349 |
56 |
2e-114
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G15330.1 |
11 |
351 |
352 |
96.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold138 |
Augustus |
mRNA |
60808 |
62091 |
. |
+ |
. |
ID=Dca8889.1;Parent=Dca8889 |
| scaffold138 |
Augustus |
exon |
60808 |
61214 |
. |
+ |
. |
ID=Dca8889.1.exon1;Parent=Dca8889.1 |
| scaffold138 |
Augustus |
exon |
61315 |
61669 |
. |
+ |
. |
ID=Dca8889.1.exon2;Parent=Dca8889.1 |
| scaffold138 |
Augustus |
exon |
61759 |
62091 |
. |
+ |
. |
ID=Dca8889.1.exon3;Parent=Dca8889.1 |
