Carnation DB

Dca9020.1

Annotation

5-exons
f-1
sp|A5C9U3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_010121#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold1385)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9020.1	134	456	457	21.66	323	30	5e-36
Target_name	Start	End	Length	Cov(%)
sp\|A5C9U3_VITVI	556	880	1797	18.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9020.1	132	270	457	9.62	139	32	2e-12
Target_name	Start	End	Length	Cov(%)
Os08t0315200-01	78	216	296	46.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1385	Augustus	mRNA	14006	16560	.	-	.	ID=Dca9020.1;Parent=Dca9020
scaffold1385	Augustus	exon	14006	14431	.	-	.	ID=Dca9020.1.exon1;Parent=Dca9020.1
scaffold1385	Augustus	exon	14558	14689	.	-	.	ID=Dca9020.1.exon2;Parent=Dca9020.1
scaffold1385	Augustus	exon	14765	15385	.	-	.	ID=Dca9020.1.exon3;Parent=Dca9020.1
scaffold1385	Augustus	exon	15471	15596	.	-	.	ID=Dca9020.1.exon4;Parent=Dca9020.1
scaffold1385	Augustus	exon	16492	16560	.	-	.	ID=Dca9020.1.exon5;Parent=Dca9020.1