Dca9107.1
Annotation
- 3-exons
- f-1
- sp|B9MST4_GOSHI#Putative ribosomal protein L28#Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)#Name=rpl28#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- Repeat List (scaffold139)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9107.1 |
1 |
148 |
149 |
75.83 |
148 |
76 |
6e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MST4_GOSHI |
1 |
149 |
150 |
99.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9107.1 |
1 |
141 |
149 |
74.49 |
141 |
78 |
1e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0706500-00 |
1 |
143 |
146 |
97.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold139 |
Augustus |
mRNA |
43817 |
45757 |
. |
+ |
. |
ID=Dca9107.1;Parent=Dca9107 |
| scaffold139 |
Augustus |
exon |
43817 |
43964 |
. |
+ |
. |
ID=Dca9107.1.exon1;Parent=Dca9107.1 |
| scaffold139 |
Augus-PASA |
exon |
44850 |
45010 |
. |
+ |
. |
ID=Dca9107.1.exon2;Parent=Dca9107.1 |
| scaffold139 |
Augus-PASA |
exon |
45617 |
45757 |
. |
+ |
. |
ID=Dca9107.1.exon3;Parent=Dca9107.1 |
