Carnation DB

Dca9116.1

Annotation

5-exons
f-1
sp|B9RQE6_RICCO#Histidine-containing phosphotransfer protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1489450#GO:0032440;GO:0004871;GO:0000160#2F1P0C
Repeat List (scaffold139)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9116.1	1	127	141	66.66	127	70	6e-49
Target_name	Start	End	Length	Cov(%)
sp\|B9RQE6_RICCO	1	136	150	90.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9116.1	6	127	141	53.9	122	59	2e-41
Target_name	Start	End	Length	Cov(%)
AT3G16360.2	1	131	145	90.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold139	Augustus	mRNA	106162	107107	.	+	.	ID=Dca9116.1;Parent=Dca9116
scaffold139	Augustus	exon	106162	106221	.	+	.	ID=Dca9116.1.exon1;Parent=Dca9116.1
scaffold139	Augustus	exon	106296	106399	.	+	.	ID=Dca9116.1.exon2;Parent=Dca9116.1
scaffold139	Augustus	exon	106514	106582	.	+	.	ID=Dca9116.1.exon3;Parent=Dca9116.1
scaffold139	Augustus	exon	106693	106764	.	+	.	ID=Dca9116.1.exon4;Parent=Dca9116.1
scaffold139	Augustus	exon	106987	107107	.	+	.	ID=Dca9116.1.exon5;Parent=Dca9116.1