Carnation DB

Dca9195.1

Annotation

6-exons
f-1
sp|B9HWF0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_883905#GO:0016021;GO:0005743;GO:0005488;GO:0055085#1F1P2C
Os05t0357200-01 Adenine nucleotide translocator 1 domain containing protein.
Repeat List (scaffold13935)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9195.1	37	181	181	27.62	145	35	2e-12
Target_name	Start	End	Length	Cov(%)
sp\|B9HWF0_POPTR	141	283	373	38.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9195.1	23	181	181	32.04	159	37	9e-16
Target_name	Start	End	Length	Cov(%)
Os05t0357200-01	138	292	337	45.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13935	Augus-PASA	mRNA	344	5205	.	+	.	ID=Dca9195.1;Parent=Dca9195
scaffold13935	Augus-PASA	exon	344	425	.	+	.	ID=Dca9195.1.exon1;Parent=Dca9195.1
scaffold13935	Augus-PASA	exon	586	681	.	+	.	ID=Dca9195.1.exon2;Parent=Dca9195.1
scaffold13935	Augus-PASA	exon	1991	2097	.	+	.	ID=Dca9195.1.exon3;Parent=Dca9195.1
scaffold13935	Augustus	exon	3342	3390	.	+	.	ID=Dca9195.1.exon4;Parent=Dca9195.1
scaffold13935	Augus-PASA	exon	3490	3602	.	+	.	ID=Dca9195.1.exon5;Parent=Dca9195.1
scaffold13935	Augus-PASA	exon	5107	5205	.	+	.	ID=Dca9195.1.exon6;Parent=Dca9195.1