Carnation DB

Dca9240.1

Annotation

9-exons
f-1
sp|B9H4B2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_207134#GO:0008270#1F0P0C
AT5G63970.1 | Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr5:25607006-25608916 REVERSE LENGTH=367
Repeat List (scaffold1396)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9240.1	54	359	365	62.19	306	74	1e-130
Target_name	Start	End	Length	Cov(%)
sp\|B9H4B2_POPTR	2	303	351	86.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9240.1	46	349	365	60.82	304	74	3e-131
Target_name	Start	End	Length	Cov(%)
AT5G63970.1	5	308	367	82.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1396	Augustus	mRNA	29012	31723	.	-	.	ID=Dca9240.1;Parent=Dca9240
scaffold1396	Augustus	exon	29012	29165	.	-	.	ID=Dca9240.1.exon1;Parent=Dca9240.1
scaffold1396	Augustus	exon	29254	29381	.	-	.	ID=Dca9240.1.exon2;Parent=Dca9240.1
scaffold1396	Augustus	exon	29621	29726	.	-	.	ID=Dca9240.1.exon3;Parent=Dca9240.1
scaffold1396	Augustus	exon	29822	29901	.	-	.	ID=Dca9240.1.exon4;Parent=Dca9240.1
scaffold1396	Augustus	exon	30001	30098	.	-	.	ID=Dca9240.1.exon5;Parent=Dca9240.1
scaffold1396	Augustus	exon	30476	30589	.	-	.	ID=Dca9240.1.exon6;Parent=Dca9240.1
scaffold1396	Augustus	exon	30672	30812	.	-	.	ID=Dca9240.1.exon7;Parent=Dca9240.1
scaffold1396	Augustus	exon	30900	30984	.	-	.	ID=Dca9240.1.exon8;Parent=Dca9240.1
scaffold1396	Augustus	exon	31532	31723	.	-	.	ID=Dca9240.1.exon9;Parent=Dca9240.1