Dca9267.1
Annotation
- 2-exons
- f-1
- sp|A5ARV9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_010143#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- AT1G21280.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7447690-7448403 REVERSE LENGTH=237
- Repeat List (scaffold1398)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9267.1 |
22 |
635 |
663 |
32.12 |
614 |
32 |
5e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ARV9_VITVI |
28 |
659 |
1523 |
41.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9267.1 |
9 |
237 |
663 |
11.61 |
229 |
33 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
2 |
230 |
237 |
96.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1398 |
Augustus |
mRNA |
54928 |
57066 |
. |
- |
. |
ID=Dca9267.1;Parent=Dca9267 |
| scaffold1398 |
Augustus |
exon |
54928 |
56114 |
. |
- |
. |
ID=Dca9267.1.exon1;Parent=Dca9267.1 |
| scaffold1398 |
Augustus |
exon |
56262 |
57066 |
. |
- |
. |
ID=Dca9267.1.exon2;Parent=Dca9267.1 |
