Dca9300.1
Annotation
- 3-exons
- f-1
- sp|B9HC95_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561506#GO:0000166;GO:0003723;GO:0003735;GO:0006412#3F1P0C
- Os01t0348700-01 Similar to 60S ribosomal protein L23a (L25).
- Repeat List (scaffold14)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9300.1 |
10 |
154 |
154 |
81.81 |
145 |
87 |
1e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HC95_POPTR |
12 |
155 |
155 |
92.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9300.1 |
1 |
154 |
154 |
81.16 |
154 |
82 |
4e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0348700-01 |
1 |
152 |
153 |
99.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold14 |
Augustus |
mRNA |
41377 |
42852 |
. |
+ |
. |
ID=Dca9300.1;Parent=Dca9300 |
| scaffold14 |
Augustus |
exon |
41377 |
41395 |
. |
+ |
. |
ID=Dca9300.1.exon1;Parent=Dca9300.1 |
| scaffold14 |
Augus-PASA |
exon |
42153 |
42513 |
. |
+ |
. |
ID=Dca9300.1.exon2;Parent=Dca9300.1 |
| scaffold14 |
Augus-PASA |
exon |
42768 |
42852 |
. |
+ |
. |
ID=Dca9300.1.exon3;Parent=Dca9300.1 |
