Carnation DB

Dca9331.1

Annotation

8-exons
f-1
sp|F6HSK3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0006g01240#unknown#0F0P0C
AT5G39790.1 | Symbols: | 5'-AMP-activated protein kinase-related | chr5:15932884-15935121 REVERSE LENGTH=273
Repeat List (scaffold14)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9331.1	18	304	304	57.89	287	61	9e-97
Target_name	Start	End	Length	Cov(%)
sp\|F6HSK3_VITVI	16	307	307	95.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9331.1	17	304	304	52.3	288	55	8e-78
Target_name	Start	End	Length	Cov(%)
AT5G39790.1	3	273	273	99.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold14	Augustus	mRNA	341266	345620	.	+	.	ID=Dca9331.1;Parent=Dca9331
scaffold14	Augustus	exon	341266	341312	.	+	.	ID=Dca9331.1.exon1;Parent=Dca9331.1
scaffold14	Augustus	exon	342216	342513	.	+	.	ID=Dca9331.1.exon2;Parent=Dca9331.1
scaffold14	Augus-PASA	exon	343251	343340	.	+	.	ID=Dca9331.1.exon3;Parent=Dca9331.1
scaffold14	Augus-PASA	exon	343746	343814	.	+	.	ID=Dca9331.1.exon4;Parent=Dca9331.1
scaffold14	Augus-PASA	exon	344124	344229	.	+	.	ID=Dca9331.1.exon5;Parent=Dca9331.1
scaffold14	Augus-PASA	exon	344417	344505	.	+	.	ID=Dca9331.1.exon6;Parent=Dca9331.1
scaffold14	Augus-PASA	exon	345244	345356	.	+	.	ID=Dca9331.1.exon7;Parent=Dca9331.1
scaffold14	Augus-PASA	exon	345518	345620	.	+	.	ID=Dca9331.1.exon8;Parent=Dca9331.1