Carnation DB

Dca9360.1

Annotation

6-exons
f-1
sp|B9S6E5_RICCO#Syntaxin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0535810#GO:0016020;GO:0016779;GO:0009058;GO:0016192#1F2P1C
Repeat List (scaffold14)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9360.1	12	173	179	68.15	162	76	3e-68
Target_name	Start	End	Length	Cov(%)
sp\|B9S6E5_RICCO	7	168	493	32.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9360.1	13	173	179	64.24	161	72	1e-67
Target_name	Start	End	Length	Cov(%)
AT2G18250.1	4	164	176	91.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold14	Augustus	mRNA	559717	561750	.	+	.	ID=Dca9360.1;Parent=Dca9360
scaffold14	Augustus	exon	559717	559851	.	+	.	ID=Dca9360.1.exon1;Parent=Dca9360.1
scaffold14	Augus-PASA	exon	559941	560012	.	+	.	ID=Dca9360.1.exon2;Parent=Dca9360.1
scaffold14	Augus-PASA	exon	560199	560258	.	+	.	ID=Dca9360.1.exon3;Parent=Dca9360.1
scaffold14	Augus-PASA	exon	560635	560729	.	+	.	ID=Dca9360.1.exon4;Parent=Dca9360.1
scaffold14	Augustus	exon	561034	561103	.	+	.	ID=Dca9360.1.exon5;Parent=Dca9360.1
scaffold14	Augustus	exon	561643	561750	.	+	.	ID=Dca9360.1.exon6;Parent=Dca9360.1