Dca9389.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1400)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9389.1 |
37 |
1505 |
1505 |
55.41 |
1469 |
55 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1 |
1492 |
1501 |
99.4 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9389.1 |
419 |
1439 |
1505 |
25.91 |
1021 |
39 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
428 |
1393 |
1539 |
62.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1400 |
Augustus |
mRNA |
14580 |
19249 |
. |
- |
. |
ID=Dca9389.1;Parent=Dca9389 |
| scaffold1400 |
Augustus |
exon |
14580 |
14765 |
. |
- |
. |
ID=Dca9389.1.exon1;Parent=Dca9389.1 |
| scaffold1400 |
Augustus |
exon |
14847 |
18302 |
. |
- |
. |
ID=Dca9389.1.exon2;Parent=Dca9389.1 |
| scaffold1400 |
Augustus |
exon |
18374 |
19249 |
. |
- |
. |
ID=Dca9389.1.exon3;Parent=Dca9389.1 |
