Dca940.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold10254)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca940.1 |
1 |
359 |
727 |
27.23 |
359 |
55 |
1e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
215 |
562 |
964 |
36.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca940.1 |
2 |
284 |
727 |
13.89 |
283 |
31 |
4e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
613 |
945 |
1401 |
23.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10254 |
Augustus |
mRNA |
7503 |
13855 |
. |
- |
. |
ID=Dca940.1;Parent=Dca940 |
| scaffold10254 |
Augustus |
exon |
7503 |
7568 |
. |
- |
. |
ID=Dca940.1.exon1;Parent=Dca940.1 |
| scaffold10254 |
Augustus |
exon |
11322 |
12611 |
. |
- |
. |
ID=Dca940.1.exon2;Parent=Dca940.1 |
| scaffold10254 |
Augustus |
exon |
13028 |
13855 |
. |
- |
. |
ID=Dca940.1.exon3;Parent=Dca940.1 |
