Carnation DB

Dca9410.1

Annotation

19-exons
f-1
sp|D7SLV1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0021g02140#GO:0008270#1F0P0C
AT2G44950.1 | Symbols: RDO4, HUB1 | histone mono-ubiquitination 1 | chr2:18542602-18548247 REVERSE LENGTH=878
Repeat List (scaffold1401)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9410.1	1	852	852	53.99	852	53	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SLV1_VITVI	1	878	878	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9410.1	1	852	852	46.83	852	46	0
Target_name	Start	End	Length	Cov(%)
AT2G44950.1	1	878	878	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1401	Augus-PASA	mRNA	40610	52724	.	-	.	ID=Dca9410.1;Parent=Dca9410
scaffold1401	Augus-PASA	exon	40610	40741	.	-	.	ID=Dca9410.1.exon1;Parent=Dca9410.1
scaffold1401	Augus-PASA	exon	41247	41409	.	-	.	ID=Dca9410.1.exon2;Parent=Dca9410.1
scaffold1401	Augus-PASA	exon	41540	41742	.	-	.	ID=Dca9410.1.exon3;Parent=Dca9410.1
scaffold1401	Augus-PASA	exon	41821	41958	.	-	.	ID=Dca9410.1.exon4;Parent=Dca9410.1
scaffold1401	Augus-PASA	exon	42925	43011	.	-	.	ID=Dca9410.1.exon5;Parent=Dca9410.1
scaffold1401	Augus-PASA	exon	43100	43172	.	-	.	ID=Dca9410.1.exon6;Parent=Dca9410.1
scaffold1401	Augus-PASA	exon	44157	44351	.	-	.	ID=Dca9410.1.exon7;Parent=Dca9410.1
scaffold1401	Augus-PASA	exon	44929	45005	.	-	.	ID=Dca9410.1.exon8;Parent=Dca9410.1
scaffold1401	Augustus	exon	45609	45680	.	-	.	ID=Dca9410.1.exon9;Parent=Dca9410.1
scaffold1401	Augustus	exon	45753	45913	.	-	.	ID=Dca9410.1.exon10;Parent=Dca9410.1
scaffold1401	Augustus	exon	46252	46438	.	-	.	ID=Dca9410.1.exon11;Parent=Dca9410.1
scaffold1401	Augustus	exon	46523	46642	.	-	.	ID=Dca9410.1.exon12;Parent=Dca9410.1
scaffold1401	Augustus	exon	46727	46849	.	-	.	ID=Dca9410.1.exon13;Parent=Dca9410.1
scaffold1401	Augustus	exon	47013	47086	.	-	.	ID=Dca9410.1.exon14;Parent=Dca9410.1
scaffold1401	Augustus	exon	47760	47918	.	-	.	ID=Dca9410.1.exon15;Parent=Dca9410.1
scaffold1401	Augustus	exon	48022	48249	.	-	.	ID=Dca9410.1.exon16;Parent=Dca9410.1
scaffold1401	Augustus	exon	49128	49215	.	-	.	ID=Dca9410.1.exon17;Parent=Dca9410.1
scaffold1401	Augustus	exon	49406	49567	.	-	.	ID=Dca9410.1.exon18;Parent=Dca9410.1
scaffold1401	Augustus	exon	52608	52724	.	-	.	ID=Dca9410.1.exon19;Parent=Dca9410.1