Carnation DB

Dca9426.1

Annotation

5-exons
f-1
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold1402)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9426.1	45	1140	1144	52.7	1096	50	0
Target_name	Start	End	Length	Cov(%)
sp\|A2I5E5_BETVU	15	1216	1501	80.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9426.1	350	1142	1144	25.52	793	34	9e-127
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	414	1211	1539	51.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1402	Augustus	mRNA	32331	37116	.	-	.	ID=Dca9426.1;Parent=Dca9426
scaffold1402	Augustus	exon	32331	33263	.	-	.	ID=Dca9426.1.exon1;Parent=Dca9426.1
scaffold1402	Augustus	exon	33357	33764	.	-	.	ID=Dca9426.1.exon2;Parent=Dca9426.1
scaffold1402	Augustus	exon	33859	35340	.	-	.	ID=Dca9426.1.exon3;Parent=Dca9426.1
scaffold1402	Augustus	exon	35419	35916	.	-	.	ID=Dca9426.1.exon4;Parent=Dca9426.1
scaffold1402	Augustus	exon	37003	37116	.	-	.	ID=Dca9426.1.exon5;Parent=Dca9426.1