Carnation DB

Dca9497.1

Annotation

9-exons
f-1
sp|B9HC81_POPTR#ABC transporter family, retinal flippase subfamily#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_416282#GO:0016021;GO:0005524;GO:0042626#2F0P1C
Repeat List (scaffold1406)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9497.1	15	418	420	65.95	404	69	5e-161
Target_name	Start	End	Length	Cov(%)
sp\|B9HC81_POPTR	121	524	570	70.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9497.1	27	418	420	59.04	392	64	8e-142
Target_name	Start	End	Length	Cov(%)
AT5G03910.1	196	587	634	61.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1406	Augustus	mRNA	22532	30774	.	-	.	ID=Dca9497.1;Parent=Dca9497
scaffold1406	Augustus	exon	22532	22673	.	-	.	ID=Dca9497.1.exon1;Parent=Dca9497.1
scaffold1406	Augustus	exon	22859	23046	.	-	.	ID=Dca9497.1.exon2;Parent=Dca9497.1
scaffold1406	Augustus	exon	23610	23695	.	-	.	ID=Dca9497.1.exon3;Parent=Dca9497.1
scaffold1406	Augustus	exon	23791	24007	.	-	.	ID=Dca9497.1.exon4;Parent=Dca9497.1
scaffold1406	Augustus	exon	25445	25528	.	-	.	ID=Dca9497.1.exon5;Parent=Dca9497.1
scaffold1406	Augustus	exon	25864	26130	.	-	.	ID=Dca9497.1.exon6;Parent=Dca9497.1
scaffold1406	Augustus	exon	26407	26514	.	-	.	ID=Dca9497.1.exon7;Parent=Dca9497.1
scaffold1406	Augustus	exon	26595	26681	.	-	.	ID=Dca9497.1.exon8;Parent=Dca9497.1
scaffold1406	Augustus	exon	30691	30774	.	-	.	ID=Dca9497.1.exon9;Parent=Dca9497.1