Dca9746.1
Annotation
- 4-exons
- f-1
- sp|Q852C7_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0096M04.110#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold142)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9746.1 |
1 |
308 |
501 |
41.31 |
308 |
65 |
6e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q852C7_ORYSJ |
1302 |
1620 |
1969 |
16.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9746.1 |
1 |
337 |
501 |
28.54 |
337 |
41 |
8e-70
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
905 |
1254 |
1401 |
24.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold142 |
Augustus |
mRNA |
260449 |
263628 |
. |
+ |
. |
ID=Dca9746.1;Parent=Dca9746 |
| scaffold142 |
Augustus |
exon |
260449 |
261372 |
. |
+ |
. |
ID=Dca9746.1.exon1;Parent=Dca9746.1 |
| scaffold142 |
Augustus |
exon |
262694 |
262773 |
. |
+ |
. |
ID=Dca9746.1.exon2;Parent=Dca9746.1 |
| scaffold142 |
Augustus |
exon |
262858 |
263327 |
. |
+ |
. |
ID=Dca9746.1.exon3;Parent=Dca9746.1 |
| scaffold142 |
Augustus |
exon |
263597 |
263628 |
. |
+ |
. |
ID=Dca9746.1.exon4;Parent=Dca9746.1 |
