Dca9849.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1425)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9849.1 |
1 |
190 |
201 |
64.67 |
190 |
69 |
2e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
810 |
999 |
1307 |
14.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9849.1 |
1 |
165 |
201 |
37.31 |
165 |
46 |
8e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
931 |
1094 |
1428 |
11.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1425 |
Augustus |
mRNA |
112280 |
118839 |
. |
- |
. |
ID=Dca9849.1;Parent=Dca9849 |
| scaffold1425 |
Augustus |
exon |
112280 |
112349 |
. |
- |
. |
ID=Dca9849.1.exon1;Parent=Dca9849.1 |
| scaffold1425 |
Augustus |
exon |
118304 |
118839 |
. |
- |
. |
ID=Dca9849.1.exon2;Parent=Dca9849.1 |
