Carnation DB

Dca9918.1

Annotation

5-exons
f-1
sp|B9N0X1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_783367#GO:0008889;GO:0006071;GO:0006629#1F2P0C
AT3G02040.1 | Symbols: SRG3 | senescence-related gene 3 | chr3:348505-349909 REVERSE LENGTH=361
Repeat List (scaffold143)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9918.1	1	379	380	70.52	379	70	2e-151
Target_name	Start	End	Length	Cov(%)
sp\|B9N0X1_POPTR	1	381	382	99.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9918.1	1	380	380	63.42	380	64	4e-135
Target_name	Start	End	Length	Cov(%)
AT3G02040.1	1	361	361	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold143	Augus-PASA	mRNA	76553	80174	.	-	.	ID=Dca9918.1;Parent=Dca9918
scaffold143	Augus-PASA	exon	76553	76784	.	-	.	ID=Dca9918.1.exon1;Parent=Dca9918.1
scaffold143	Augus-PASA	exon	76898	77472	.	-	.	ID=Dca9918.1.exon2;Parent=Dca9918.1
scaffold143	Augus-PASA	exon	77584	77643	.	-	.	ID=Dca9918.1.exon3;Parent=Dca9918.1
scaffold143	Augus-PASA	exon	79804	79976	.	-	.	ID=Dca9918.1.exon4;Parent=Dca9918.1
scaffold143	Augus-PASA	exon	80072	80174	.	-	.	ID=Dca9918.1.exon5;Parent=Dca9918.1