Carnation DB

Dca9938.1

Annotation

6-exons
f-1
sp|Q6ZHE3_ORYSJ#Os02g0773400 protein#Oryza sativa subsp japonica (Rice)#Name=OJ1611_C08.28#GO:0016020;GO:0005216#1F0P1C
Repeat List (scaffold143)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9938.1	73	250	250	32	178	40	1e-26
Target_name	Start	End	Length	Cov(%)
sp\|Q6ZHE3_ORYSJ	235	436	772	26.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9938.1	73	250	250	32	178	40	1e-27
Target_name	Start	End	Length	Cov(%)
Os02t0773400-01	235	436	773	26.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold143	Augustus	mRNA	246675	251031	.	+	.	ID=Dca9938.1;Parent=Dca9938
scaffold143	Augustus	exon	246675	246731	.	+	.	ID=Dca9938.1.exon1;Parent=Dca9938.1
scaffold143	Augustus	exon	247393	247510	.	+	.	ID=Dca9938.1.exon2;Parent=Dca9938.1
scaffold143	Augustus	exon	247608	247669	.	+	.	ID=Dca9938.1.exon3;Parent=Dca9938.1
scaffold143	Augustus	exon	250142	250276	.	+	.	ID=Dca9938.1.exon4;Parent=Dca9938.1
scaffold143	Augustus	exon	250561	250761	.	+	.	ID=Dca9938.1.exon5;Parent=Dca9938.1
scaffold143	Augustus	exon	250852	251031	.	+	.	ID=Dca9938.1.exon6;Parent=Dca9938.1