Carnation DB

Dca9944.1

Annotation

5-exons
f-1
sp|B9I3W9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570318#GO:0005524#1F0P0C
Repeat List (scaffold1430)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9944.1	1	1666	1691	52.69	1666	53	0
Target_name	Start	End	Length	Cov(%)
sp\|B9I3W9_POPTR	1	1675	1713	97.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9944.1	2	1666	1691	48.37	1665	49	0
Target_name	Start	End	Length	Cov(%)
AT3G48770.1	194	1860	1899	87.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1430	Augustus	mRNA	17647	25456	.	+	.	ID=Dca9944.1;Parent=Dca9944
scaffold1430	Augustus	exon	17647	17811	.	+	.	ID=Dca9944.1.exon1;Parent=Dca9944.1
scaffold1430	Augustus	exon	19530	19740	.	+	.	ID=Dca9944.1.exon2;Parent=Dca9944.1
scaffold1430	Augustus	exon	19963	24583	.	+	.	ID=Dca9944.1.exon3;Parent=Dca9944.1
scaffold1430	Augustus	exon	24651	24701	.	+	.	ID=Dca9944.1.exon4;Parent=Dca9944.1
scaffold1430	Augus-PASA	exon	25429	25456	.	+	.	ID=Dca9944.1.exon5;Parent=Dca9944.1