scaffold10016 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold10016 |
2 |
188 |
+ |
RS282 |
Unspecified |
scaffold10016 |
260 |
294 |
+ |
(T)n |
Simple_repeat |
scaffold10016 |
802 |
862 |
+ |
A-rich |
Low_complexity |
scaffold10016 |
971 |
990 |
+ |
(T)n |
Simple_repeat |
scaffold10016 |
1307 |
1359 |
+ |
(ACTCCGA)n |
Simple_repeat |
scaffold10016 |
1692 |
1768 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
1847 |
2089 |
- |
RS342 |
Unspecified |
scaffold10016 |
2191 |
2225 |
+ |
(TTC)n |
Simple_repeat |
scaffold10016 |
2224 |
2261 |
+ |
(TTAA)n |
Simple_repeat |
scaffold10016 |
2447 |
2484 |
+ |
(AT)n |
Simple_repeat |
scaffold10016 |
2614 |
2647 |
+ |
(TAAGTTC)n |
Simple_repeat |
scaffold10016 |
3356 |
3372 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
4252 |
5763 |
+ |
hAT |
hAT(TransposonPSI) |
scaffold10016 |
4538 |
4575 |
+ |
TWIFBIG |
DNA/hAT-Ac |
scaffold10016 |
6432 |
6559 |
- |
RS1599 |
Unspecified |
scaffold10016 |
7099 |
7141 |
+ |
(T)n |
Simple_repeat |
scaffold10016 |
7756 |
7783 |
+ |
(ATATT)n |
Simple_repeat |
scaffold10016 |
7879 |
8394 |
- |
PL90 |
Unspecified |
scaffold10016 |
7976 |
8486 |
- |
PL90 |
Unspecified |
scaffold10016 |
8498 |
8552 |
+ |
(AAC)n |
Simple_repeat |
scaffold10016 |
8860 |
9002 |
+ |
(CAA)n |
Simple_repeat |
scaffold10016 |
9077 |
9110 |
+ |
(AG)n |
Simple_repeat |
scaffold10016 |
9125 |
9159 |
+ |
GA-rich |
Low_complexity |
scaffold10016 |
9186 |
9237 |
+ |
RS3756 |
Unspecified |
scaffold10016 |
10348 |
10391 |
+ |
(GATGGAT)n |
Simple_repeat |
scaffold10016 |
10392 |
10401 |
+ |
(TGGA)n |
Simple_repeat |
scaffold10016 |
10615 |
10647 |
+ |
(TTA)n |
Simple_repeat |
scaffold10016 |
11228 |
11250 |
+ |
(T)n |
Simple_repeat |
scaffold10016 |
11537 |
11639 |
- |
RS148 |
Unspecified |
scaffold10016 |
11738 |
11764 |
+ |
G-rich |
Low_complexity |
scaffold10016 |
11861 |
11896 |
+ |
(CCCTC)n |
Simple_repeat |
scaffold10016 |
12428 |
13981 |
+ |
hAT |
hAT(TransposonPSI) |
scaffold10016 |
12728 |
12772 |
+ |
TWIFBIG |
DNA/hAT-Ac |
scaffold10016 |
14488 |
14547 |
+ |
(T)n |
Simple_repeat |
scaffold10016 |
14889 |
14897 |
+ |
(TATT)n |
Simple_repeat |
scaffold10016 |
14898 |
14927 |
+ |
(TA)n |
Simple_repeat |
scaffold10016 |
14928 |
14941 |
+ |
(TATT)n |
Simple_repeat |
scaffold10016 |
16735 |
16774 |
+ |
A-rich |
Low_complexity |
scaffold10016 |
19680 |
20468 |
- |
hAT |
hAT(TransposonPSI) |
scaffold10016 |
20437 |
21138 |
- |
hAT |
hAT(TransposonPSI) |
scaffold10016 |
21829 |
21904 |
+ |
PL464 |
Unspecified |
scaffold10016 |
24707 |
24744 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
26392 |
26430 |
+ |
(CAACATA)n |
Simple_repeat |
scaffold10016 |
26551 |
26603 |
+ |
A-rich |
Low_complexity |
scaffold10016 |
28110 |
28126 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
28669 |
28707 |
+ |
(CAACATA)n |
Simple_repeat |
scaffold10016 |
29155 |
29198 |
+ |
GA-rich |
Low_complexity |
scaffold10016 |
29818 |
29846 |
+ |
(T)n |
Simple_repeat |
scaffold10016 |
30581 |
30624 |
+ |
A-rich |
Low_complexity |
scaffold10016 |
31220 |
31260 |
+ |
A-rich |
Low_complexity |
scaffold10016 |
31983 |
32714 |
+ |
Gypsy-133_GM-I |
LTR/Gypsy |
scaffold10016 |
32104 |
32120 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
33096 |
33149 |
+ |
A-rich |
Low_complexity |
scaffold10016 |
37312 |
37335 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
40463 |
40519 |
+ |
(AC)n |
Simple_repeat |
scaffold10016 |
40634 |
40664 |
+ |
(CA)n |
Simple_repeat |
scaffold10016 |
41057 |
41181 |
+ |
(GAT)n |
Simple_repeat |
scaffold10016 |
41132 |
41248 |
+ |
GA-rich |
Low_complexity |
scaffold10016 |
41275 |
41558 |
- |
RS13359 |
Unspecified |
scaffold10016 |
41716 |
41832 |
+ |
A-rich |
Low_complexity |
scaffold10016 |
43367 |
43407 |
+ |
A-rich |
Low_complexity |
scaffold10016 |
45011 |
45030 |
+ |
(T)n |
Simple_repeat |
scaffold10016 |
53544 |
53590 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
54757 |
54969 |
+ |
RS18 |
Unspecified |
scaffold10016 |
55009 |
55199 |
- |
RS128 |
Unspecified |
scaffold10016 |
57449 |
57479 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
57900 |
57972 |
+ |
A-rich |
Low_complexity |
scaffold10016 |
58278 |
58306 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
64516 |
64543 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
64687 |
64898 |
- |
PL40 |
Unspecified |
scaffold10016 |
65344 |
65465 |
+ |
RS728 |
Unspecified |
scaffold10016 |
65458 |
65830 |
+ |
RS326 |
Unspecified |
scaffold10016 |
66492 |
66528 |
- |
RS326 |
Unspecified |
scaffold10016 |
67974 |
68750 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold10016 |
68065 |
68123 |
+ |
A-rich |
Low_complexity |
scaffold10016 |
68368 |
68534 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold10016 |
68804 |
69206 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold10016 |
69319 |
70162 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold10016 |
70421 |
71315 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold10016 |
72438 |
72578 |
+ |
RS2570 |
Unspecified |
scaffold10016 |
72625 |
72853 |
+ |
(TATTT)n |
Simple_repeat |
scaffold10016 |
72763 |
72853 |
+ |
(TATTT)n |
Simple_repeat |
scaffold10016 |
72929 |
72986 |
+ |
(AT)n |
Simple_repeat |
scaffold10016 |
73052 |
73327 |
- |
PL727 |
Unspecified |
scaffold10016 |
73140 |
73341 |
- |
RS683 |
Unspecified |
scaffold10016 |
73599 |
73665 |
+ |
(GAAGAT)n |
Simple_repeat |
scaffold10016 |
73955 |
74049 |
+ |
RS2570 |
Unspecified |
scaffold10016 |
74073 |
74159 |
+ |
RS2537 |
Unspecified |
scaffold10016 |
74160 |
74297 |
+ |
RS4 |
Unspecified |
scaffold10016 |
74546 |
74592 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold10016 |
74850 |
74909 |
+ |
(ATT)n |
Simple_repeat |
scaffold10016 |
74850 |
75002 |
+ |
(ATT)n |
Simple_repeat |
scaffold10016 |
74896 |
75002 |
+ |
RS4 |
Unspecified |
scaffold10016 |
75789 |
75821 |
+ |
(T)n |
Simple_repeat |
scaffold10016 |
78799 |
78957 |
- |
RS10497 |
Unspecified |
scaffold10016 |
78799 |
78931 |
+ |
RS2570 |
Unspecified |
scaffold10016 |
78978 |
79205 |
+ |
(TATTT)n |
Simple_repeat |
scaffold10016 |
79116 |
79205 |
+ |
(TATTT)n |
Simple_repeat |
scaffold10016 |
81823 |
81944 |
+ |
RS8168 |
Unspecified |
scaffold10016 |
82570 |
82780 |
- |
RS18 |
Unspecified |
scaffold10016 |
82904 |
83170 |
+ |
RS102 |
Unspecified |
scaffold10016 |
83271 |
83518 |
- |
RS356 |
Unspecified |
scaffold10016 |
87311 |
87438 |
+ |
RTE-2_STu |
LINE/RTE-BovB |
scaffold10016 |
88850 |
88886 |
+ |
(TAC)n |
Simple_repeat |
scaffold10016 |
94239 |
94294 |
+ |
(TTTGTT)n |
Simple_repeat |
scaffold10016 |
94473 |
94510 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
95194 |
95219 |
+ |
(A)n |
Simple_repeat |
scaffold10016 |
95913 |
95948 |
+ |
(CCTCTTT)n |
Simple_repeat |
scaffold10016 |
99478 |
99554 |
+ |
RS310 |
Unspecified |
scaffold10016 |
100510 |
100610 |
+ |
TNT1_LTR |
LTR/Copia |
scaffold10016 |
100510 |
100672 |
+ |
TNT1_LTR |
LTR/Copia |
scaffold10016 |
100587 |
100672 |
- |
RS14986 |
Unspecified |
scaffold10016 |
101360 |
101448 |
+ |
(ATC)n |
Simple_repeat |
scaffold10016 |
102092 |
102123 |
+ |
(GATAC)n |
Simple_repeat |
scaffold10016 |
102612 |
102640 |
+ |
(T)n |
Simple_repeat |
scaffold10016 |
102910 |
103363 |
+ |
PL352 |
Unspecified |
scaffold10016 |
103575 |
103606 |
+ |
(TTATTT)n |
Simple_repeat |
scaffold10016 |
103639 |
103692 |
+ |
(ATTTCTA)n |
Simple_repeat |