scaffold10373 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold10373 |
543 |
605 |
+ |
RS2938 |
Unspecified |
scaffold10373 |
754 |
853 |
- |
RS4759 |
Unspecified |
scaffold10373 |
856 |
917 |
- |
PL464 |
Unspecified |
scaffold10373 |
940 |
972 |
+ |
(TTAA)n |
Simple_repeat |
scaffold10373 |
998 |
1108 |
+ |
RS8354 |
Unspecified |
scaffold10373 |
1132 |
1235 |
+ |
PL595 |
Unspecified |
scaffold10373 |
1406 |
1499 |
+ |
(TATTT)n |
Simple_repeat |
scaffold10373 |
1506 |
1551 |
+ |
(TAA)n |
Simple_repeat |
scaffold10373 |
1650 |
1677 |
+ |
(ATA)n |
Simple_repeat |
scaffold10373 |
3235 |
3281 |
+ |
(A)n |
Simple_repeat |
scaffold10373 |
3609 |
4063 |
- |
RS1275 |
Unspecified |
scaffold10373 |
4064 |
4375 |
- |
Copia-101_Mad-I |
LTR/Copia |
scaffold10373 |
5237 |
6633 |
- |
Copia-101_Mad-I |
LTR/Copia |
scaffold10373 |
6791 |
7776 |
- |
Copia-101_Mad-I |
LTR/Copia |
scaffold10373 |
7795 |
8088 |
- |
Copia-101_Mad-I |
LTR/Copia |
scaffold10373 |
8091 |
9415 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold10373 |
8091 |
8822 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold10373 |
8182 |
8327 |
- |
Copia-101_Mad-I |
LTR/Copia |
scaffold10373 |
8654 |
9415 |
- |
RS1296 |
Unspecified |
scaffold10373 |
9310 |
9445 |
+ |
RS7033 |
Unspecified |
scaffold10373 |
9409 |
9495 |
- |
RS1296 |
Unspecified |
scaffold10373 |
9696 |
9761 |
- |
RS11461 |
Unspecified |
scaffold10373 |
9857 |
9968 |
+ |
RS8043 |
Unspecified |
scaffold10373 |
10324 |
10426 |
+ |
RS3409 |
Unspecified |
scaffold10373 |
10429 |
10648 |
+ |
RS91 |
Unspecified |
scaffold10373 |
10651 |
11165 |
- |
RS1296 |
Unspecified |
scaffold10373 |
11060 |
11195 |
+ |
RS7033 |
Unspecified |
scaffold10373 |
11159 |
11245 |
- |
RS1296 |
Unspecified |
scaffold10373 |
11446 |
11511 |
- |
RS11461 |
Unspecified |
scaffold10373 |
11619 |
11730 |
+ |
RS8043 |
Unspecified |
scaffold10373 |
12086 |
12188 |
+ |
RS3409 |
Unspecified |
scaffold10373 |
12188 |
12323 |
+ |
Ogre-PT3_I-int |
LTR/Gypsy |
scaffold10373 |
12196 |
12660 |
- |
RS1275 |
Unspecified |
scaffold10373 |
12670 |
12727 |
+ |
(TCA)n |
Simple_repeat |
scaffold10373 |
12837 |
12861 |
+ |
(CTT)n |
Simple_repeat |
scaffold10373 |
13175 |
14811 |
- |
Copia-1_EPa-I |
LTR/Copia |
scaffold10373 |
15114 |
16345 |
- |
ATCopia22I |
LTR/Copia |
scaffold10373 |
16440 |
16615 |
- |
RS12438 |
Unspecified |
scaffold10373 |
16620 |
16685 |
- |
Copia-1_EPa-I |
LTR/Copia |
scaffold10373 |
16733 |
17365 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold10373 |
17617 |
17715 |
- |
RS1 |
Unspecified |
scaffold10373 |
23800 |
23927 |
+ |
RS17390 |
Unspecified |
scaffold10373 |
25480 |
25565 |
+ |
(CCTCCCA)n |
Simple_repeat |
scaffold10373 |
25527 |
25585 |
+ |
(CTCCATC)n |
Simple_repeat |
scaffold10373 |
26045 |
26145 |
+ |
RS15398 |
Unspecified |
scaffold10373 |
26158 |
26263 |
+ |
RS11437 |
Unspecified |
scaffold10373 |
26496 |
26520 |
+ |
(T)n |
Simple_repeat |
scaffold10373 |
26953 |
27048 |
+ |
(CCT)n |
Simple_repeat |
scaffold10373 |
27009 |
27059 |
+ |
(CTCCCT)n |
Simple_repeat |
scaffold10373 |
27518 |
27618 |
+ |
RS15398 |
Unspecified |
scaffold10373 |
27631 |
27736 |
+ |
RS11437 |
Unspecified |
scaffold10373 |
27752 |
27872 |
+ |
RS6643 |
Unspecified |
scaffold10373 |
28057 |
28413 |
+ |
RS14760 |
Unspecified |
scaffold10373 |
28539 |
28645 |
+ |
RS11437 |
Unspecified |
scaffold10373 |
28658 |
28778 |
+ |
RS6643 |
Unspecified |
scaffold10373 |
28891 |
28990 |
+ |
RS222 |
Unspecified |
scaffold10373 |
29021 |
29217 |
- |
RS904 |
Unspecified |
scaffold10373 |
29072 |
29236 |
- |
RS1322 |
Unspecified |
scaffold10373 |
29093 |
29238 |
+ |
RS2962 |
Unspecified |
scaffold10373 |
29316 |
29672 |
+ |
RS14760 |
Unspecified |
scaffold10373 |
29676 |
29781 |
+ |
RS11437 |
Unspecified |
scaffold10373 |
29797 |
29917 |
+ |
RS6643 |
Unspecified |
scaffold10373 |
30102 |
30458 |
+ |
RS14760 |
Unspecified |
scaffold10373 |
31650 |
31696 |
+ |
(TAATATT)n |
Simple_repeat |
scaffold10373 |
31798 |
31828 |
+ |
(AGGTT)n |
Simple_repeat |
scaffold10373 |
32666 |
32705 |
+ |
(T)n |
Simple_repeat |
scaffold10373 |
32826 |
32870 |
+ |
(T)n |
Simple_repeat |
scaffold10373 |
33166 |
33229 |
- |
RS750 |
Unspecified |
scaffold10373 |
33663 |
33696 |
+ |
(ATT)n |
Simple_repeat |
scaffold10373 |
35861 |
35949 |
- |
RS41 |
Unspecified |
scaffold10373 |
35997 |
36035 |
+ |
(ATTGA)n |
Simple_repeat |
scaffold10373 |
38811 |
38899 |
+ |
A-rich |
Low_complexity |
scaffold10373 |
42653 |
42704 |
+ |
(TTATAT)n |
Simple_repeat |
scaffold10373 |
42704 |
43414 |
- |
RS994 |
Unspecified |
scaffold10373 |
46532 |
46558 |
+ |
(TATTT)n |
Simple_repeat |
scaffold10373 |
46782 |
47001 |
+ |
RS4 |
Unspecified |
scaffold10373 |
46952 |
47021 |
+ |
RS54 |
Unspecified |
scaffold10373 |
47439 |
47477 |
+ |
(TTC)n |
Simple_repeat |
scaffold10373 |
47509 |
47583 |
+ |
(TTTTTA)n |
Simple_repeat |
scaffold10373 |
47668 |
47738 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold10373 |
48703 |
49331 |
- |
RS1529 |
Unspecified |
scaffold10373 |
49485 |
49529 |
+ |
(TTTA)n |
Simple_repeat |
scaffold10373 |
49941 |
50035 |
+ |
(AATTTTA)n |
Simple_repeat |
scaffold10373 |
50141 |
50324 |
- |
RS9399 |
Unspecified |
scaffold10373 |
50814 |
50862 |
+ |
A-rich |
Low_complexity |
scaffold10373 |
50863 |
51161 |
+ |
RS311 |
Unspecified |
scaffold10373 |
51234 |
51322 |
+ |
(AATT)n |
Simple_repeat |
scaffold10373 |
52028 |
52134 |
- |
Copia-47_VV-I |
LTR/Copia |
scaffold10373 |
52302 |
52353 |
+ |
ATLINEIII |
LINE/L1 |
scaffold10373 |
52310 |
52414 |
+ |
MuDR-N1_ZM |
DNA/MULE-MuDR |
scaffold10373 |
52471 |
52512 |
- |
RS18020 |
Unspecified |
scaffold10373 |
52482 |
52917 |
- |
RS534 |
Unspecified |
scaffold10373 |
52734 |
53581 |
+ |
RS630 |
Unspecified |
scaffold10373 |
53376 |
53637 |
- |
RS8162 |
Unspecified |
scaffold10373 |
53931 |
54438 |
- |
RS534 |
Unspecified |
scaffold10373 |
55729 |
55758 |
+ |
(ATTGAA)n |
Simple_repeat |
scaffold10373 |
56839 |
56886 |
- |
RS5812 |
Unspecified |
scaffold10373 |
58228 |
58256 |
+ |
(T)n |
Simple_repeat |
scaffold10373 |
59902 |
59921 |
+ |
(ATA)n |
Simple_repeat |
scaffold10373 |
66548 |
66582 |
+ |
(T)n |
Simple_repeat |
scaffold10373 |
72001 |
72033 |
+ |
(T)n |
Simple_repeat |
scaffold10373 |
72447 |
72481 |
+ |
(CAATTCG)n |
Simple_repeat |
scaffold10373 |
72501 |
72582 |
+ |
RS4030 |
Unspecified |
scaffold10373 |
72710 |
72917 |
- |
Copia-37_GM-I |
LTR/Copia |
scaffold10373 |
72782 |
72924 |
+ |
Copia-45_ZM-I |
LTR/Copia |
scaffold10373 |
73046 |
73125 |
- |
RS4030 |
Unspecified |
scaffold10373 |
76683 |
76740 |
- |
SINE2-1_PD |
SINE/tRNA-RTE |
scaffold10373 |
77006 |
77024 |
+ |
(T)n |
Simple_repeat |
scaffold10373 |
78920 |
80911 |
- |
LINE |
LINE(TransposonPSI) |
scaffold10373 |
79041 |
79924 |
- |
LINE1-26_SBi |
LINE/L1 |
scaffold10373 |
83736 |
83891 |
- |
RS2401 |
Unspecified |
scaffold10373 |
86620 |
86641 |
+ |
(AAT)n |
Simple_repeat |
scaffold10373 |
89657 |
89812 |
- |
RS2401 |
Unspecified |
scaffold10373 |
93026 |
93160 |
+ |
RS109 |
Unspecified |