scaffold1038 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1038 |
284 |
348 |
+ |
RETROSAT5_I-int |
LTR/Gypsy |
| scaffold1038 |
553 |
606 |
- |
RS30 |
Unspecified |
| scaffold1038 |
600 |
1145 |
+ |
RS265 |
Unspecified |
| scaffold1038 |
1585 |
1760 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold1038 |
1764 |
2495 |
- |
PL265 |
Unspecified |
| scaffold1038 |
2867 |
3282 |
+ |
PL643 |
Unspecified |
| scaffold1038 |
3351 |
4426 |
- |
RS1415 |
Unspecified |
| scaffold1038 |
4823 |
4876 |
+ |
A-rich |
Low_complexity |
| scaffold1038 |
5193 |
5472 |
+ |
RS247 |
Unspecified |
| scaffold1038 |
5925 |
5986 |
+ |
A-rich |
Low_complexity |
| scaffold1038 |
5992 |
6920 |
+ |
PL355 |
Unspecified |
| scaffold1038 |
8860 |
8931 |
+ |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold1038 |
9598 |
9666 |
- |
PL638 |
Unspecified |
| scaffold1038 |
9666 |
9817 |
- |
RS756 |
Unspecified |
| scaffold1038 |
13318 |
13371 |
+ |
WHAM3_TM-int |
LTR/Gypsy |
| scaffold1038 |
14131 |
14167 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold1038 |
14415 |
14456 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold1038 |
14477 |
14529 |
+ |
(TTCATT)n |
Simple_repeat |
| scaffold1038 |
14544 |
14955 |
- |
PL83 |
Unspecified |
| scaffold1038 |
16298 |
16869 |
+ |
PL321 |
Unspecified |
| scaffold1038 |
17026 |
17253 |
+ |
RS76 |
Unspecified |
| scaffold1038 |
17476 |
17607 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold1038 |
18290 |
18415 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold1038 |
19032 |
19080 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold1038 |
19184 |
20343 |
+ |
RS2579 |
Unspecified |
| scaffold1038 |
20196 |
20409 |
- |
RS709 |
Unspecified |
| scaffold1038 |
23786 |
23853 |
+ |
(ACAACA)n |
Simple_repeat |
| scaffold1038 |
23859 |
24780 |
+ |
PL355 |
Unspecified |
| scaffold1038 |
24781 |
24847 |
+ |
RS234 |
Unspecified |
| scaffold1038 |
24861 |
24919 |
+ |
(AACAACC)n |
Simple_repeat |
| scaffold1038 |
24975 |
25445 |
- |
RS110 |
Unspecified |
| scaffold1038 |
24983 |
25365 |
+ |
RS2548 |
Unspecified |
| scaffold1038 |
26062 |
26107 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1038 |
26206 |
26267 |
+ |
(A)n |
Simple_repeat |
| scaffold1038 |
26348 |
26374 |
+ |
(A)n |
Simple_repeat |
| scaffold1038 |
26597 |
26768 |
- |
RS184 |
Unspecified |
| scaffold1038 |
28649 |
28702 |
- |
RS184 |
Unspecified |
| scaffold1038 |
29600 |
29623 |
+ |
(T)n |
Simple_repeat |
| scaffold1038 |
30169 |
30195 |
+ |
(T)n |
Simple_repeat |
| scaffold1038 |
30372 |
30415 |
+ |
A-rich |
Low_complexity |
| scaffold1038 |
30839 |
30880 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold1038 |
30879 |
30918 |
+ |
A-rich |
Low_complexity |
| scaffold1038 |
31971 |
32071 |
+ |
(AATTATA)n |
Simple_repeat |
| scaffold1038 |
32572 |
32591 |
+ |
(TGCT)n |
Simple_repeat |
| scaffold1038 |
34062 |
34129 |
+ |
(TCCCC)n |
Simple_repeat |
| scaffold1038 |
34293 |
34352 |
+ |
GA-rich |
Low_complexity |
| scaffold1038 |
35266 |
35319 |
+ |
A-rich |
Low_complexity |
| scaffold1038 |
35466 |
35928 |
+ |
RS2105 |
Unspecified |
| scaffold1038 |
36029 |
36225 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold1038 |
36384 |
36556 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold1038 |
37742 |
37778 |
+ |
(TAGTACG)n |
Simple_repeat |
| scaffold1038 |
37991 |
38054 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold1038 |
38568 |
38610 |
+ |
A-rich |
Low_complexity |
| scaffold1038 |
39038 |
39058 |
+ |
(T)n |
Simple_repeat |
| scaffold1038 |
39540 |
39695 |
+ |
RS79 |
Unspecified |
| scaffold1038 |
40642 |
40987 |
+ |
(CTCCC)n |
Simple_repeat |
| scaffold1038 |
40642 |
40683 |
+ |
(CTCCC)n |
Simple_repeat |
| scaffold1038 |
40664 |
40987 |
- |
PL9 |
Unspecified |
| scaffold1038 |
41228 |
41307 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold1038 |
41644 |
41837 |
- |
RS757 |
Unspecified |
| scaffold1038 |
42824 |
42946 |
- |
RS5 |
Unspecified |
| scaffold1038 |
43101 |
43131 |
+ |
(A)n |
Simple_repeat |
| scaffold1038 |
43192 |
43360 |
+ |
RS1292 |
Unspecified |
| scaffold1038 |
43640 |
43754 |
- |
RS5314 |
Unspecified |
| scaffold1038 |
44081 |
44118 |
+ |
(T)n |
Simple_repeat |
| scaffold1038 |
44119 |
44144 |
+ |
(CTTTTTT)n |
Simple_repeat |
| scaffold1038 |
44987 |
45236 |
+ |
RS47 |
Unspecified |
| scaffold1038 |
45240 |
45261 |
+ |
(TAGA)n |
Simple_repeat |
| scaffold1038 |
46569 |
46601 |
+ |
(TA)n |
Simple_repeat |
| scaffold1038 |
48975 |
49111 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold1038 |
50033 |
50053 |
+ |
(ACA)n |
Simple_repeat |
| scaffold1038 |
50148 |
50168 |
+ |
(TCA)n |
Simple_repeat |
| scaffold1038 |
51490 |
51535 |
+ |
(A)n |
Simple_repeat |
| scaffold1038 |
51645 |
51672 |
+ |
(GAT)n |
Simple_repeat |
| scaffold1038 |
51756 |
51802 |
+ |
GA-rich |
Low_complexity |
| scaffold1038 |
51975 |
52157 |
- |
RS17860 |
Unspecified |
| scaffold1038 |
53517 |
54032 |
- |
RS799 |
Unspecified |
| scaffold1038 |
54432 |
54537 |
+ |
PL452 |
Unspecified |
| scaffold1038 |
57009 |
57730 |
+ |
RS1686 |
Unspecified |
| scaffold1038 |
58597 |
58734 |
- |
PL18 |
Unspecified |
| scaffold1038 |
58598 |
58775 |
+ |
RS76 |
Unspecified |
| scaffold1038 |
59596 |
59703 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold1038 |
61182 |
61308 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold1038 |
61328 |
61750 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold1038 |
61359 |
61502 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold1038 |
61962 |
62642 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold1038 |
63000 |
63351 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold1038 |
63000 |
63318 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold1038 |
63000 |
63122 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold1038 |
63079 |
63318 |
+ |
RS2055 |
Unspecified |
| scaffold1038 |
63099 |
63351 |
+ |
PL642 |
Unspecified |
| scaffold1038 |
63400 |
63528 |
+ |
RS314 |
Unspecified |
| scaffold1038 |
63449 |
63802 |
+ |
RS1094 |
Unspecified |
| scaffold1038 |
63675 |
63892 |
+ |
RS2202 |
Unspecified |
| scaffold1038 |
64183 |
65590 |
+ |
RS824 |
Unspecified |
| scaffold1038 |
68178 |
68859 |
- |
RS2725 |
Unspecified |
| scaffold1038 |
70008 |
70507 |
+ |
RS1496 |
Unspecified |
| scaffold1038 |
70386 |
70593 |
- |
RS7985 |
Unspecified |
| scaffold1038 |
70615 |
70780 |
+ |
RS730 |
Unspecified |
| scaffold1038 |
70748 |
72060 |
+ |
RS730 |
Unspecified |
| scaffold1038 |
72128 |
72541 |
+ |
PL407 |
Unspecified |
| scaffold1038 |
75522 |
76027 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold1038 |
75906 |
76052 |
- |
Copia-10_TC-I |
LTR/Copia |
| scaffold1038 |
117282 |
117615 |
- |
RS672 |
Unspecified |