scaffold10635 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold10635 |
2019 |
2138 |
+ |
RS9137 |
Unspecified |
scaffold10635 |
2913 |
2957 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
5415 |
5465 |
+ |
(AATGAGA)n |
Simple_repeat |
scaffold10635 |
6225 |
6259 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
6677 |
6750 |
- |
RS13489 |
Unspecified |
scaffold10635 |
7389 |
7483 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold10635 |
7427 |
7483 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold10635 |
8679 |
8723 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
12627 |
12678 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
13208 |
13252 |
+ |
G-rich |
Low_complexity |
scaffold10635 |
13441 |
13466 |
+ |
(TATTT)n |
Simple_repeat |
scaffold10635 |
13487 |
13542 |
+ |
(AGCTGAA)n |
Simple_repeat |
scaffold10635 |
14301 |
14469 |
- |
RS233 |
Unspecified |
scaffold10635 |
14320 |
14476 |
+ |
RS2719 |
Unspecified |
scaffold10635 |
14652 |
14751 |
+ |
RS8762 |
Unspecified |
scaffold10635 |
22874 |
23115 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold10635 |
23861 |
23902 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
24057 |
24091 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
24233 |
24249 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
25152 |
25384 |
+ |
LTR2-ZM_LTR |
LTR |
scaffold10635 |
26410 |
26725 |
+ |
PL357 |
Unspecified |
scaffold10635 |
27425 |
27457 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
27703 |
27738 |
+ |
(CTTCATA)n |
Simple_repeat |
scaffold10635 |
28403 |
28486 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold10635 |
28512 |
28600 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold10635 |
28897 |
28940 |
+ |
(AGTTTAG)n |
Simple_repeat |
scaffold10635 |
29396 |
29432 |
- |
RS12304 |
Unspecified |
scaffold10635 |
32618 |
32648 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
33186 |
33242 |
- |
PL319 |
Unspecified |
scaffold10635 |
33201 |
33242 |
+ |
PL413 |
Unspecified |
scaffold10635 |
33233 |
33501 |
- |
PL319 |
Unspecified |
scaffold10635 |
33789 |
34085 |
+ |
RS1746 |
Unspecified |
scaffold10635 |
34426 |
34635 |
- |
RS11189 |
Unspecified |
scaffold10635 |
34647 |
34790 |
- |
RS15433 |
Unspecified |
scaffold10635 |
34693 |
34906 |
- |
RS4 |
Unspecified |
scaffold10635 |
34963 |
35200 |
+ |
RS18 |
Unspecified |
scaffold10635 |
35432 |
35458 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
35537 |
35567 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
35612 |
35687 |
+ |
(ATCACTA)n |
Simple_repeat |
scaffold10635 |
36228 |
36333 |
+ |
RS4475 |
Unspecified |
scaffold10635 |
36448 |
36510 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold10635 |
36531 |
36547 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
36665 |
36917 |
+ |
RS356 |
Unspecified |
scaffold10635 |
36775 |
36944 |
+ |
RS5596 |
Unspecified |
scaffold10635 |
37137 |
37172 |
+ |
(TTTAATG)n |
Simple_repeat |
scaffold10635 |
38192 |
38226 |
+ |
(TAATTA)n |
Simple_repeat |
scaffold10635 |
38666 |
38977 |
- |
RS2860 |
Unspecified |
scaffold10635 |
40169 |
40316 |
- |
RS5474 |
Unspecified |
scaffold10635 |
40781 |
40848 |
+ |
(TGTTGAA)n |
Simple_repeat |
scaffold10635 |
41083 |
41156 |
+ |
(GTTGGT)n |
Simple_repeat |
scaffold10635 |
41444 |
41486 |
+ |
(TGT)n |
Simple_repeat |
scaffold10635 |
41584 |
41626 |
+ |
(TG)n |
Simple_repeat |
scaffold10635 |
42385 |
42540 |
+ |
RS8755 |
Unspecified |
scaffold10635 |
45581 |
45979 |
+ |
Gypsy-36_Mad-I |
LTR/Gypsy |
scaffold10635 |
46227 |
46264 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
46274 |
46921 |
+ |
Gypsy-36_Mad-I |
LTR/Gypsy |
scaffold10635 |
47343 |
47472 |
+ |
RS14455 |
Unspecified |
scaffold10635 |
47603 |
47775 |
- |
RS11139 |
Unspecified |
scaffold10635 |
48285 |
48438 |
+ |
RS7778 |
Unspecified |
scaffold10635 |
48490 |
48550 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
49245 |
49341 |
+ |
RS5923 |
Unspecified |
scaffold10635 |
49830 |
49960 |
+ |
Gypsy-13_Mad-I |
LTR/Gypsy |
scaffold10635 |
49958 |
50078 |
- |
RS5474 |
Unspecified |
scaffold10635 |
50253 |
50430 |
- |
RS8325 |
Unspecified |
scaffold10635 |
50497 |
50726 |
- |
RS5942 |
Unspecified |
scaffold10635 |
50764 |
50917 |
- |
RS8949 |
Unspecified |
scaffold10635 |
51416 |
51708 |
+ |
RS535 |
Unspecified |
scaffold10635 |
53317 |
53418 |
- |
RS5474 |
Unspecified |
scaffold10635 |
53719 |
53745 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
53875 |
54095 |
- |
PL352 |
Unspecified |
scaffold10635 |
54098 |
54202 |
- |
RS35 |
Unspecified |
scaffold10635 |
54267 |
54309 |
- |
RS2860 |
Unspecified |
scaffold10635 |
54363 |
54496 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold10635 |
54502 |
54596 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold10635 |
54691 |
54724 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
54912 |
55056 |
- |
RS5474 |
Unspecified |
scaffold10635 |
55246 |
55269 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
55322 |
55501 |
- |
RS8325 |
Unspecified |
scaffold10635 |
55834 |
56467 |
+ |
(AT)n |
Simple_repeat |
scaffold10635 |
56443 |
56467 |
+ |
(AT)n |
Simple_repeat |
scaffold10635 |
57157 |
57190 |
+ |
(TATTT)n |
Simple_repeat |
scaffold10635 |
57303 |
57331 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
57962 |
57994 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
58241 |
58696 |
+ |
PL798 |
Unspecified |
scaffold10635 |
58487 |
59173 |
- |
RS2517 |
Unspecified |
scaffold10635 |
59551 |
59620 |
+ |
SZ-63_int-int |
LTR/Gypsy |
scaffold10635 |
59551 |
59712 |
+ |
SZ-63_int-int |
LTR/Gypsy |
scaffold10635 |
59605 |
59712 |
+ |
RS120 |
Unspecified |
scaffold10635 |
59752 |
59780 |
+ |
(TAA)n |
Simple_repeat |
scaffold10635 |
59836 |
59922 |
+ |
(TCAT)n |
Simple_repeat |
scaffold10635 |
60016 |
60222 |
+ |
RS4596 |
Unspecified |
scaffold10635 |
60216 |
60257 |
+ |
RS2562 |
Unspecified |
scaffold10635 |
60587 |
60816 |
- |
RS5942 |
Unspecified |
scaffold10635 |
60867 |
61021 |
- |
RS8949 |
Unspecified |
scaffold10635 |
61398 |
61504 |
- |
RS10519 |
Unspecified |
scaffold10635 |
61448 |
61634 |
- |
RS2860 |
Unspecified |
scaffold10635 |
62826 |
62927 |
- |
RS5474 |
Unspecified |
scaffold10635 |
63115 |
63194 |
- |
HAT-10_Mad |
DNA/hAT-Ac |
scaffold10635 |
63648 |
63681 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
64345 |
64435 |
+ |
(ATATTA)n |
Simple_repeat |
scaffold10635 |
64562 |
64600 |
+ |
RS17600 |
Unspecified |
scaffold10635 |
64567 |
64833 |
- |
RS17600 |
Unspecified |
scaffold10635 |
64789 |
64840 |
+ |
RS17600 |
Unspecified |
scaffold10635 |
64801 |
64845 |
+ |
RS10261 |
Unspecified |
scaffold10635 |
64829 |
64888 |
- |
PL11 |
Unspecified |
scaffold10635 |
64981 |
65076 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold10635 |
65165 |
65218 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
65230 |
65254 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
65413 |
65724 |
- |
RS2860 |
Unspecified |
scaffold10635 |
67064 |
67115 |
+ |
(TTGACG)n |
Simple_repeat |
scaffold10635 |
67533 |
67550 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
67790 |
67862 |
+ |
DNA-TA-1_STu |
DNA/TcMar-Stowaway |
scaffold10635 |
68948 |
69000 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
71694 |
71943 |
+ |
RS17442 |
Unspecified |
scaffold10635 |
71986 |
72015 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
72048 |
72078 |
+ |
(TTTTG)n |
Simple_repeat |
scaffold10635 |
72079 |
72114 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
72616 |
72672 |
- |
RS9244 |
Unspecified |
scaffold10635 |
72637 |
72876 |
+ |
RS15198 |
Unspecified |
scaffold10635 |
72886 |
72932 |
- |
RS9244 |
Unspecified |
scaffold10635 |
73777 |
73809 |
+ |
(ATTTCA)n |
Simple_repeat |
scaffold10635 |
74615 |
74664 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
74894 |
74982 |
+ |
(TTTAATT)n |
Simple_repeat |
scaffold10635 |
74979 |
75088 |
+ |
RS13607 |
Unspecified |
scaffold10635 |
76926 |
77267 |
+ |
RS7687 |
Unspecified |
scaffold10635 |
77194 |
77422 |
+ |
RS8009 |
Unspecified |
scaffold10635 |
78667 |
78811 |
+ |
RS11595 |
Unspecified |
scaffold10635 |
78816 |
78927 |
+ |
RS9244 |
Unspecified |
scaffold10635 |
79230 |
79341 |
+ |
RS9244 |
Unspecified |
scaffold10635 |
80041 |
80240 |
- |
RS11646 |
Unspecified |
scaffold10635 |
80732 |
80855 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
scaffold10635 |
82036 |
82173 |
- |
PL506 |
Unspecified |
scaffold10635 |
82054 |
82173 |
+ |
RS72 |
Unspecified |
scaffold10635 |
82832 |
83175 |
+ |
RS7687 |
Unspecified |
scaffold10635 |
83102 |
83328 |
+ |
RS8009 |
Unspecified |
scaffold10635 |
83355 |
83402 |
+ |
RS10537 |
Unspecified |
scaffold10635 |
83441 |
83835 |
+ |
RS2226 |
Unspecified |
scaffold10635 |
83874 |
83981 |
+ |
RS13864 |
Unspecified |
scaffold10635 |
83987 |
84203 |
+ |
RS13244 |
Unspecified |
scaffold10635 |
84128 |
84248 |
+ |
RS18138 |
Unspecified |
scaffold10635 |
84285 |
84397 |
+ |
hAT-17N1_ZM |
DNA/hAT-Ac |
scaffold10635 |
84314 |
84406 |
- |
hAT-17N1_ZM |
DNA/hAT-Ac |
scaffold10635 |
85162 |
85187 |
+ |
(AAGAG)n |
Simple_repeat |
scaffold10635 |
85258 |
85303 |
+ |
RS645 |
Unspecified |
scaffold10635 |
85424 |
85704 |
+ |
RS891 |
Unspecified |
scaffold10635 |
86321 |
86491 |
+ |
RS8048 |
Unspecified |
scaffold10635 |
87090 |
87623 |
+ |
Mariner-1_GM |
DNA/TcMar-Stowaway |
scaffold10635 |
87687 |
87816 |
+ |
PL378 |
Unspecified |
scaffold10635 |
87792 |
87936 |
+ |
RS11595 |
Unspecified |
scaffold10635 |
87941 |
88052 |
+ |
RS9244 |
Unspecified |
scaffold10635 |
88355 |
88466 |
+ |
RS9244 |
Unspecified |
scaffold10635 |
89166 |
89365 |
- |
RS11646 |
Unspecified |
scaffold10635 |
89860 |
89973 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
89973 |
90576 |
+ |
RS562 |
Unspecified |
scaffold10635 |
90590 |
90769 |
+ |
Mariner1_BV |
DNA/TcMar-Stowaway |
scaffold10635 |
91100 |
91151 |
+ |
(TTGTATT)n |
Simple_repeat |
scaffold10635 |
91682 |
91812 |
- |
RS6335 |
Unspecified |
scaffold10635 |
92136 |
92263 |
+ |
RS13027 |
Unspecified |
scaffold10635 |
92274 |
92431 |
+ |
RS10537 |
Unspecified |
scaffold10635 |
92469 |
93026 |
+ |
RS2226 |
Unspecified |
scaffold10635 |
93079 |
93195 |
+ |
RS3406 |
Unspecified |
scaffold10635 |
93409 |
93470 |
+ |
(ATTTA)n |
Simple_repeat |
scaffold10635 |
93758 |
94007 |
+ |
RS17442 |
Unspecified |
scaffold10635 |
94050 |
94079 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
94112 |
94142 |
+ |
(TTTTG)n |
Simple_repeat |
scaffold10635 |
94143 |
94178 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
94648 |
94704 |
- |
RS9244 |
Unspecified |
scaffold10635 |
94669 |
94908 |
+ |
RS15198 |
Unspecified |
scaffold10635 |
94918 |
94964 |
- |
RS9244 |
Unspecified |
scaffold10635 |
95269 |
95490 |
+ |
(GGT)n |
Simple_repeat |
scaffold10635 |
95506 |
95556 |
+ |
GA-rich |
Low_complexity |
scaffold10635 |
95659 |
95801 |
+ |
RS3406 |
Unspecified |
scaffold10635 |
95925 |
96039 |
+ |
RS223 |
Unspecified |
scaffold10635 |
96689 |
96736 |
+ |
(GGT)n |
Simple_repeat |
scaffold10635 |
96852 |
96936 |
+ |
RS7687 |
Unspecified |
scaffold10635 |
96925 |
97001 |
+ |
RS8009 |
Unspecified |
scaffold10635 |
98712 |
98856 |
+ |
RS11595 |
Unspecified |
scaffold10635 |
98861 |
98972 |
+ |
RS9244 |
Unspecified |
scaffold10635 |
98979 |
99178 |
- |
RS11646 |
Unspecified |
scaffold10635 |
100380 |
100447 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
100456 |
100555 |
+ |
(CAA)n |
Simple_repeat |
scaffold10635 |
101031 |
101074 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
101075 |
101184 |
+ |
(TAA)n |
Simple_repeat |
scaffold10635 |
101381 |
101624 |
- |
RS114 |
Unspecified |
scaffold10635 |
101716 |
101748 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
101790 |
101918 |
- |
RS2544 |
Unspecified |
scaffold10635 |
102274 |
102355 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
102406 |
102501 |
- |
RS1239 |
Unspecified |
scaffold10635 |
102496 |
103168 |
+ |
PL169 |
Unspecified |
scaffold10635 |
103303 |
103388 |
- |
RS6294 |
Unspecified |
scaffold10635 |
104496 |
104552 |
+ |
(ATATTT)n |
Simple_repeat |
scaffold10635 |
104555 |
104633 |
+ |
PL169 |
Unspecified |
scaffold10635 |
104643 |
104724 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
105298 |
105401 |
- |
Gypsy-29_PTr-LTR |
LTR/Gypsy |
scaffold10635 |
105751 |
105836 |
+ |
(GGT)n |
Simple_repeat |
scaffold10635 |
105866 |
105935 |
+ |
(TTA)n |
Simple_repeat |
scaffold10635 |
106282 |
106366 |
+ |
(AATTC)n |
Simple_repeat |
scaffold10635 |
106493 |
106703 |
+ |
RS3138 |
Unspecified |
scaffold10635 |
106796 |
106889 |
+ |
RS10537 |
Unspecified |
scaffold10635 |
106928 |
107323 |
+ |
RS2226 |
Unspecified |
scaffold10635 |
107362 |
107469 |
+ |
RS13864 |
Unspecified |
scaffold10635 |
107479 |
107695 |
+ |
RS13244 |
Unspecified |
scaffold10635 |
107620 |
107740 |
+ |
RS18138 |
Unspecified |
scaffold10635 |
107792 |
107831 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
109153 |
109175 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
111131 |
111245 |
+ |
RS223 |
Unspecified |
scaffold10635 |
111964 |
112071 |
- |
PL24 |
Unspecified |
scaffold10635 |
112059 |
112221 |
- |
PL24 |
Unspecified |
scaffold10635 |
112424 |
112646 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold10635 |
113218 |
113271 |
- |
PL517 |
Unspecified |
scaffold10635 |
113283 |
113306 |
+ |
(AT)n |
Simple_repeat |
scaffold10635 |
113550 |
113583 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
113739 |
113765 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
114409 |
114551 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
116963 |
117206 |
+ |
RS4 |
Unspecified |
scaffold10635 |
117351 |
117523 |
+ |
ATHATN4 |
DNA/hAT-Ac |
scaffold10635 |
117544 |
117570 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
118066 |
118115 |
+ |
HAT-13_Mad |
DNA/hAT-Ac |
scaffold10635 |
118093 |
118207 |
+ |
hAT-17N1_ZM |
DNA/hAT-Ac |
scaffold10635 |
118316 |
118379 |
+ |
(CTT)n |
Simple_repeat |
scaffold10635 |
118764 |
118809 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
119320 |
119367 |
+ |
(TC)n |
Simple_repeat |
scaffold10635 |
119469 |
119737 |
+ |
LTR2-ZM_LTR |
LTR |
scaffold10635 |
121904 |
121989 |
+ |
(TTA)n |
Simple_repeat |
scaffold10635 |
121990 |
122030 |
+ |
(GTA)n |
Simple_repeat |
scaffold10635 |
122099 |
122169 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
122285 |
122301 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
122493 |
123058 |
+ |
RS1781 |
Unspecified |
scaffold10635 |
122892 |
123256 |
+ |
PL757 |
Unspecified |
scaffold10635 |
122984 |
123301 |
+ |
RS1716 |
Unspecified |
scaffold10635 |
126412 |
126530 |
- |
RS3158 |
Unspecified |
scaffold10635 |
127966 |
128008 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold10635 |
128336 |
128369 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold10635 |
128485 |
128542 |
+ |
(TTTTGA)n |
Simple_repeat |
scaffold10635 |
129163 |
129189 |
+ |
(TTATT)n |
Simple_repeat |
scaffold10635 |
129822 |
129867 |
+ |
(TATTT)n |
Simple_repeat |
scaffold10635 |
129983 |
130098 |
- |
RS2956 |
Unspecified |
scaffold10635 |
130340 |
130444 |
+ |
RS2485 |
Unspecified |
scaffold10635 |
130514 |
130787 |
+ |
RS11758 |
Unspecified |
scaffold10635 |
131228 |
131256 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
131644 |
131739 |
+ |
ATENSPM1 |
DNA/CMC-EnSpm |
scaffold10635 |
131808 |
131897 |
- |
RS649 |
Unspecified |
scaffold10635 |
131894 |
132116 |
+ |
RS217 |
Unspecified |
scaffold10635 |
132698 |
132726 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
132845 |
133022 |
+ |
RS17579 |
Unspecified |
scaffold10635 |
133069 |
133182 |
- |
RS12465 |
Unspecified |
scaffold10635 |
133371 |
133558 |
- |
RS2858 |
Unspecified |
scaffold10635 |
134336 |
135761 |
+ |
RS1172 |
Unspecified |
scaffold10635 |
135618 |
135873 |
- |
RS581 |
Unspecified |
scaffold10635 |
135872 |
136867 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
136829 |
136867 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
137234 |
137453 |
+ |
RS11159 |
Unspecified |
scaffold10635 |
137577 |
137696 |
+ |
RS12616 |
Unspecified |
scaffold10635 |
137698 |
138012 |
- |
ATENSPM4 |
DNA/CMC-EnSpm |
scaffold10635 |
138164 |
138213 |
+ |
(ACACCCA)n |
Simple_repeat |
scaffold10635 |
138639 |
138851 |
+ |
RS6894 |
Unspecified |
scaffold10635 |
138874 |
138894 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
139219 |
139318 |
- |
RS97 |
Unspecified |
scaffold10635 |
139420 |
139451 |
+ |
(TTTA)n |
Simple_repeat |
scaffold10635 |
139751 |
139860 |
- |
RS13969 |
Unspecified |
scaffold10635 |
140503 |
140531 |
+ |
(AACCG)n |
Simple_repeat |
scaffold10635 |
141416 |
141515 |
+ |
G-rich |
Low_complexity |
scaffold10635 |
141527 |
141816 |
+ |
RS8320 |
Unspecified |
scaffold10635 |
141885 |
142015 |
+ |
RS4058 |
Unspecified |
scaffold10635 |
142080 |
142360 |
+ |
RS4100 |
Unspecified |
scaffold10635 |
142369 |
142614 |
- |
RS3257 |
Unspecified |
scaffold10635 |
142615 |
142642 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
142765 |
142792 |
+ |
(CCGGG)n |
Simple_repeat |
scaffold10635 |
142934 |
143143 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold10635 |
143212 |
143261 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
143348 |
143516 |
+ |
PL637 |
Unspecified |
scaffold10635 |
143597 |
143864 |
+ |
RS1120 |
Unspecified |
scaffold10635 |
143734 |
144681 |
+ |
RS1203 |
Unspecified |
scaffold10635 |
146687 |
146812 |
- |
PL387 |
Unspecified |
scaffold10635 |
146687 |
146798 |
+ |
PL608 |
Unspecified |
scaffold10635 |
146882 |
146908 |
+ |
G-rich |
Low_complexity |
scaffold10635 |
146933 |
147275 |
+ |
PL637 |
Unspecified |
scaffold10635 |
147706 |
147752 |
+ |
(TCTATAA)n |
Simple_repeat |
scaffold10635 |
153820 |
153873 |
+ |
(ACTCTCA)n |
Simple_repeat |
scaffold10635 |
154098 |
154157 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
154455 |
154523 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
154775 |
154815 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
155729 |
155789 |
+ |
(ATATTTT)n |
Simple_repeat |
scaffold10635 |
155957 |
156057 |
- |
LT1_EPa |
LTR? |
scaffold10635 |
157081 |
157179 |
- |
RS15131 |
Unspecified |
scaffold10635 |
157166 |
158594 |
+ |
RS1172 |
Unspecified |
scaffold10635 |
158462 |
158706 |
- |
RS581 |
Unspecified |
scaffold10635 |
159273 |
159322 |
+ |
(ATTCTTGT)n |
Simple_repeat |
scaffold10635 |
159886 |
160994 |
+ |
RS311 |
Unspecified |
scaffold10635 |
160075 |
160922 |
+ |
RS884 |
Unspecified |
scaffold10635 |
161000 |
161036 |
+ |
(ATATAG)n |
Simple_repeat |
scaffold10635 |
161033 |
161181 |
- |
RS15131 |
Unspecified |
scaffold10635 |
162498 |
162883 |
- |
RS4761 |
Unspecified |
scaffold10635 |
163410 |
163595 |
- |
RS4149 |
Unspecified |
scaffold10635 |
163939 |
164088 |
+ |
RS38 |
Unspecified |
scaffold10635 |
164148 |
164414 |
- |
RS106 |
Unspecified |
scaffold10635 |
164588 |
164607 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
164660 |
164701 |
+ |
(ATTT)n |
Simple_repeat |
scaffold10635 |
164777 |
164850 |
+ |
(ATGA)n |
Simple_repeat |
scaffold10635 |
165222 |
165256 |
+ |
(TTGT)n |
Simple_repeat |
scaffold10635 |
166125 |
166151 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
166201 |
166219 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
166235 |
166271 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
166389 |
166499 |
- |
RS170 |
Unspecified |
scaffold10635 |
166503 |
166638 |
+ |
RS522 |
Unspecified |
scaffold10635 |
166521 |
166681 |
+ |
RS6556 |
Unspecified |
scaffold10635 |
167627 |
167683 |
+ |
(GACTTA)n |
Simple_repeat |
scaffold10635 |
169589 |
169611 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
170181 |
170272 |
- |
LT1_EPa |
LTR? |
scaffold10635 |
170445 |
170475 |
+ |
(TTC)n |
Simple_repeat |
scaffold10635 |
171049 |
171080 |
+ |
(TTGT)n |
Simple_repeat |
scaffold10635 |
171257 |
171281 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
172014 |
172125 |
+ |
PL517 |
Unspecified |
scaffold10635 |
172126 |
172159 |
+ |
(TAT)n |
Simple_repeat |
scaffold10635 |
172162 |
172383 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
172162 |
172197 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
172190 |
172383 |
+ |
RS4835 |
Unspecified |
scaffold10635 |
172259 |
172402 |
+ |
RS10572 |
Unspecified |
scaffold10635 |
172672 |
172824 |
+ |
(TTA)n |
Simple_repeat |
scaffold10635 |
172828 |
172907 |
+ |
(ATT)n |
Simple_repeat |
scaffold10635 |
172933 |
173047 |
+ |
(CAGCT)n |
Simple_repeat |
scaffold10635 |
173200 |
173221 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
173637 |
173745 |
+ |
RS522 |
Unspecified |
scaffold10635 |
173734 |
173848 |
- |
RS8095 |
Unspecified |
scaffold10635 |
174558 |
174688 |
+ |
(TCGGG)n |
Simple_repeat |
scaffold10635 |
174835 |
175029 |
+ |
(TCGGG)n |
Simple_repeat |
scaffold10635 |
175607 |
175630 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
175909 |
175946 |
+ |
(CTACTCA)n |
Simple_repeat |
scaffold10635 |
176088 |
176315 |
+ |
RS10216 |
Unspecified |
scaffold10635 |
176350 |
176379 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
177025 |
177119 |
+ |
(ATAAGAA)n |
Simple_repeat |
scaffold10635 |
177140 |
177351 |
+ |
RS10518 |
Unspecified |
scaffold10635 |
177299 |
177605 |
+ |
RS8789 |
Unspecified |
scaffold10635 |
177344 |
177721 |
+ |
RS468 |
Unspecified |
scaffold10635 |
177784 |
177806 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
178451 |
178488 |
+ |
(CTACTCA)n |
Simple_repeat |
scaffold10635 |
180447 |
180469 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
181035 |
181080 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold10635 |
183404 |
183438 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold10635 |
183585 |
183604 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
183666 |
183741 |
+ |
RS4300 |
Unspecified |
scaffold10635 |
183766 |
184051 |
- |
RS1095 |
Unspecified |
scaffold10635 |
184233 |
184300 |
+ |
(TAATTA)n |
Simple_repeat |
scaffold10635 |
184486 |
184541 |
+ |
G-rich |
Low_complexity |
scaffold10635 |
185075 |
185096 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
185243 |
185297 |
+ |
(AAC)n |
Simple_repeat |
scaffold10635 |
186210 |
186250 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
186487 |
186545 |
+ |
(TTAA)n |
Simple_repeat |
scaffold10635 |
187724 |
187757 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
187874 |
187927 |
+ |
(ATTC)n |
Simple_repeat |
scaffold10635 |
192142 |
192165 |
+ |
(TAC)n |
Simple_repeat |
scaffold10635 |
192632 |
192670 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
192718 |
192768 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
193283 |
193525 |
+ |
RS4 |
Unspecified |
scaffold10635 |
194339 |
194373 |
+ |
(AAAAT)n |
Simple_repeat |
scaffold10635 |
194522 |
194548 |
+ |
(CGT)n |
Simple_repeat |
scaffold10635 |
196353 |
196390 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
196509 |
196532 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
198010 |
198055 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
203643 |
203670 |
+ |
(TTATT)n |
Simple_repeat |
scaffold10635 |
204369 |
204397 |
+ |
(AATGTG)n |
Simple_repeat |
scaffold10635 |
206803 |
206853 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold10635 |
206854 |
206927 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold10635 |
207254 |
207735 |
- |
PL271 |
Unspecified |
scaffold10635 |
207732 |
208440 |
- |
RS1232 |
Unspecified |
scaffold10635 |
208202 |
208494 |
- |
RS11142 |
Unspecified |
scaffold10635 |
208400 |
208828 |
+ |
RS3373 |
Unspecified |
scaffold10635 |
208822 |
208875 |
+ |
RS208 |
Unspecified |
scaffold10635 |
208969 |
209020 |
+ |
Caulimovirus-1_GM |
LTR/Caulimovirus |
scaffold10635 |
209048 |
209091 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
210045 |
210077 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
210164 |
210320 |
+ |
RS79 |
Unspecified |
scaffold10635 |
210297 |
210403 |
+ |
RS3756 |
Unspecified |
scaffold10635 |
210321 |
210417 |
+ |
RS79 |
Unspecified |
scaffold10635 |
210570 |
210586 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
210661 |
210711 |
+ |
(AAT)n |
Simple_repeat |
scaffold10635 |
211218 |
211252 |
+ |
(TTTTGT)n |
Simple_repeat |
scaffold10635 |
211527 |
211748 |
+ |
RS17326 |
Unspecified |
scaffold10635 |
211584 |
211776 |
+ |
RS4 |
Unspecified |
scaffold10635 |
212796 |
212812 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
214950 |
215014 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold10635 |
215062 |
215140 |
+ |
(TGAAC)n |
Simple_repeat |
scaffold10635 |
219130 |
219160 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
219339 |
219379 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
219793 |
219824 |
+ |
(TTTTTG)n |
Simple_repeat |
scaffold10635 |
220598 |
220856 |
- |
RS237 |
Unspecified |
scaffold10635 |
221211 |
221775 |
+ |
Copia-30-I_VV |
LTR/Copia |
scaffold10635 |
222016 |
222201 |
- |
RS15377 |
Unspecified |
scaffold10635 |
222219 |
225128 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold10635 |
222273 |
223505 |
+ |
Copia-30-I_VV |
LTR/Copia |
scaffold10635 |
224012 |
224987 |
+ |
Copia-30-I_VV |
LTR/Copia |
scaffold10635 |
225633 |
226230 |
- |
PL364 |
Unspecified |
scaffold10635 |
226234 |
226254 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
226676 |
226739 |
+ |
(AATCA)n |
Simple_repeat |
scaffold10635 |
227315 |
227538 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
227315 |
227355 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
227346 |
227538 |
- |
RS2841 |
Unspecified |
scaffold10635 |
227776 |
227839 |
+ |
(AATCA)n |
Simple_repeat |
scaffold10635 |
228611 |
228663 |
+ |
(CAGCAAC)n |
Simple_repeat |
scaffold10635 |
229599 |
229720 |
+ |
(ATG)n |
Simple_repeat |
scaffold10635 |
229831 |
229962 |
- |
RS9757 |
Unspecified |
scaffold10635 |
230000 |
230051 |
+ |
(CTTTTAA)n |
Simple_repeat |
scaffold10635 |
230066 |
230404 |
- |
RS2297 |
Unspecified |
scaffold10635 |
230109 |
230404 |
- |
RS2297 |
Unspecified |
scaffold10635 |
230436 |
231031 |
+ |
Copia-31_GM-I |
LTR/Copia |
scaffold10635 |
231976 |
232188 |
- |
RS4 |
Unspecified |
scaffold10635 |
232631 |
233070 |
- |
PL3 |
Unspecified |
scaffold10635 |
233655 |
233695 |
+ |
(CT)n |
Simple_repeat |
scaffold10635 |
234409 |
234434 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
234837 |
234876 |
+ |
(TTAA)n |
Simple_repeat |
scaffold10635 |
235919 |
236005 |
+ |
(CCAATAA)n |
Simple_repeat |
scaffold10635 |
236048 |
236139 |
+ |
RS2542 |
Unspecified |
scaffold10635 |
236072 |
236159 |
+ |
RS4028 |
Unspecified |
scaffold10635 |
236303 |
236723 |
- |
RS2626 |
Unspecified |
scaffold10635 |
236737 |
236764 |
+ |
(CAT)n |
Simple_repeat |
scaffold10635 |
237295 |
237338 |
+ |
(AATTTT)n |
Simple_repeat |
scaffold10635 |
237340 |
237606 |
+ |
RS112 |
Unspecified |
scaffold10635 |
237610 |
238128 |
- |
RS270 |
Unspecified |
scaffold10635 |
238231 |
238300 |
+ |
(GAATTAT)n |
Simple_repeat |
scaffold10635 |
238723 |
238759 |
+ |
(CTCTCTT)n |
Simple_repeat |
scaffold10635 |
240360 |
240430 |
+ |
RS1055 |
Unspecified |
scaffold10635 |
240462 |
240647 |
- |
RS5292 |
Unspecified |
scaffold10635 |
241228 |
241251 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
247015 |
247068 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
248648 |
248680 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
248701 |
248742 |
+ |
(ACC)n |
Simple_repeat |
scaffold10635 |
249507 |
249567 |
+ |
(GACCC)n |
Simple_repeat |
scaffold10635 |
249618 |
249664 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
249665 |
249698 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
249821 |
249849 |
+ |
(TCT)n |
Simple_repeat |
scaffold10635 |
249850 |
249879 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
251193 |
251209 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
253984 |
254010 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
254418 |
254479 |
+ |
(CCCTTAA)n |
Simple_repeat |
scaffold10635 |
254480 |
254575 |
+ |
(TAACCC)n |
Simple_repeat |
scaffold10635 |
260487 |
260530 |
+ |
(TGAAGAT)n |
Simple_repeat |
scaffold10635 |
260724 |
260889 |
- |
RS1400 |
Unspecified |
scaffold10635 |
260808 |
260908 |
- |
RS2854 |
Unspecified |
scaffold10635 |
260996 |
261030 |
+ |
(TCA)n |
Simple_repeat |
scaffold10635 |
261376 |
261409 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
261441 |
261611 |
- |
RS17860 |
Unspecified |
scaffold10635 |
261590 |
261633 |
- |
RS18371 |
Unspecified |
scaffold10635 |
261701 |
261808 |
+ |
RS2854 |
Unspecified |
scaffold10635 |
261719 |
261895 |
+ |
RS1400 |
Unspecified |
scaffold10635 |
261974 |
262002 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
262229 |
262368 |
+ |
RS12466 |
Unspecified |
scaffold10635 |
262373 |
262432 |
+ |
(TTTTA)n |
Simple_repeat |
scaffold10635 |
262476 |
262584 |
+ |
RS12072 |
Unspecified |
scaffold10635 |
262589 |
262721 |
+ |
RS11519 |
Unspecified |
scaffold10635 |
263724 |
263760 |
+ |
A-rich |
Low_complexity |
scaffold10635 |
263788 |
263925 |
- |
RS12466 |
Unspecified |
scaffold10635 |
264734 |
264769 |
+ |
(TAA)n |
Simple_repeat |
scaffold10635 |
264882 |
264968 |
+ |
RS17573 |
Unspecified |
scaffold10635 |
265630 |
265724 |
- |
RS4475 |
Unspecified |
scaffold10635 |
265964 |
266025 |
+ |
(TTCAA)n |
Simple_repeat |
scaffold10635 |
266080 |
266124 |
- |
RS1793 |
Unspecified |
scaffold10635 |
266165 |
266194 |
+ |
(A)n |
Simple_repeat |
scaffold10635 |
266627 |
266840 |
+ |
(TTTG)n |
Simple_repeat |
scaffold10635 |
266627 |
266683 |
+ |
(TTTG)n |
Simple_repeat |
scaffold10635 |
266670 |
266840 |
- |
RS1587 |
Unspecified |
scaffold10635 |
267655 |
267737 |
+ |
RS2958 |
Unspecified |
scaffold10635 |
268468 |
268556 |
- |
RS3465 |
Unspecified |
scaffold10635 |
268491 |
268650 |
+ |
RS3465 |
Unspecified |
scaffold10635 |
269064 |
269104 |
+ |
(AT)n |
Simple_repeat |
scaffold10635 |
269371 |
269464 |
+ |
(TTCG)n |
Simple_repeat |
scaffold10635 |
269371 |
269783 |
+ |
(TTCG)n |
Simple_repeat |
scaffold10635 |
269424 |
269783 |
+ |
RS7748 |
Unspecified |
scaffold10635 |
269740 |
269850 |
+ |
RS11151 |
Unspecified |
scaffold10635 |
269854 |
270148 |
+ |
RS11151 |
Unspecified |
scaffold10635 |
270268 |
270786 |
- |
RS2894 |
Unspecified |
scaffold10635 |
270591 |
271133 |
+ |
RS8271 |
Unspecified |
scaffold10635 |
270981 |
271210 |
+ |
RS8271 |
Unspecified |
scaffold10635 |
271492 |
271665 |
+ |
RS8271 |
Unspecified |
scaffold10635 |
272068 |
272259 |
- |
RS4241 |
Unspecified |
scaffold10635 |
272160 |
272335 |
+ |
RS4614 |
Unspecified |
scaffold10635 |
272342 |
273128 |
- |
RS2009 |
Unspecified |
scaffold10635 |
273878 |
274181 |
+ |
(ATGGTG)n |
Simple_repeat |
scaffold10635 |
274871 |
274940 |
+ |
(TT)n |
Simple_repeat |
scaffold10635 |
275345 |
275393 |
+ |
(TTATTT)n |
Simple_repeat |
scaffold10635 |
275731 |
275786 |
+ |
GA-rich |
Low_complexity |
scaffold10635 |
276203 |
276237 |
+ |
(T)n |
Simple_repeat |
scaffold10635 |
276483 |
276582 |
+ |
RS5843 |
Unspecified |
scaffold10635 |
276586 |
277545 |
+ |
RS3765 |
Unspecified |
scaffold10635 |
277555 |
277828 |
+ |
RS2756 |
Unspecified |