scaffold10637 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold10637 |
482 |
511 |
+ |
(CACAA)n |
Simple_repeat |
| scaffold10637 |
900 |
932 |
+ |
GA-rich |
Low_complexity |
| scaffold10637 |
1054 |
1084 |
+ |
(CA)n |
Simple_repeat |
| scaffold10637 |
1340 |
1413 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
1489 |
1512 |
+ |
(A)n |
Simple_repeat |
| scaffold10637 |
3656 |
3741 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold10637 |
4061 |
4094 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold10637 |
4860 |
4922 |
+ |
(TTTTTAC)n |
Simple_repeat |
| scaffold10637 |
5280 |
5313 |
+ |
(CTT)n |
Simple_repeat |
| scaffold10637 |
6116 |
6163 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
6753 |
6800 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
6907 |
6935 |
+ |
(TCTCCC)n |
Simple_repeat |
| scaffold10637 |
8562 |
8631 |
+ |
(TA)n |
Simple_repeat |
| scaffold10637 |
8732 |
8804 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold10637 |
8828 |
8859 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold10637 |
9565 |
9902 |
+ |
PL2 |
Unspecified |
| scaffold10637 |
9932 |
10309 |
- |
RS283 |
Unspecified |
| scaffold10637 |
10311 |
10517 |
+ |
PL767 |
Unspecified |
| scaffold10637 |
11077 |
11149 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold10637 |
11148 |
11295 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold10637 |
11296 |
11369 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold10637 |
11722 |
11751 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
12438 |
12455 |
+ |
(T)n |
Simple_repeat |
| scaffold10637 |
12899 |
12958 |
+ |
(AAT)n |
Simple_repeat |
| scaffold10637 |
13156 |
13189 |
+ |
(AAC)n |
Simple_repeat |
| scaffold10637 |
14116 |
14229 |
- |
RS5410 |
Unspecified |
| scaffold10637 |
14270 |
14340 |
+ |
RS697 |
Unspecified |
| scaffold10637 |
14498 |
14704 |
- |
RS2282 |
Unspecified |
| scaffold10637 |
14618 |
14827 |
- |
RS2282 |
Unspecified |
| scaffold10637 |
14832 |
14893 |
+ |
RS18024 |
Unspecified |
| scaffold10637 |
15367 |
15414 |
+ |
(TTTTAGA)n |
Simple_repeat |
| scaffold10637 |
15432 |
15638 |
- |
RS2282 |
Unspecified |
| scaffold10637 |
15783 |
15889 |
- |
RS18024 |
Unspecified |
| scaffold10637 |
15880 |
15922 |
+ |
RS18024 |
Unspecified |
| scaffold10637 |
16022 |
16126 |
+ |
RS2282 |
Unspecified |
| scaffold10637 |
16144 |
16396 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
16144 |
16186 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
16175 |
16396 |
+ |
RS2282 |
Unspecified |
| scaffold10637 |
16314 |
16526 |
+ |
RS2282 |
Unspecified |
| scaffold10637 |
16449 |
16639 |
+ |
RS2282 |
Unspecified |
| scaffold10637 |
16827 |
17039 |
+ |
RS2282 |
Unspecified |
| scaffold10637 |
16965 |
17171 |
+ |
RS2282 |
Unspecified |
| scaffold10637 |
17530 |
17830 |
+ |
RS2282 |
Unspecified |
| scaffold10637 |
17743 |
17964 |
+ |
RS2282 |
Unspecified |
| scaffold10637 |
17883 |
18099 |
+ |
RS2282 |
Unspecified |
| scaffold10637 |
18017 |
18228 |
+ |
RS2282 |
Unspecified |
| scaffold10637 |
18466 |
18577 |
- |
RS12776 |
Unspecified |
| scaffold10637 |
18817 |
18899 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold10637 |
19462 |
19517 |
+ |
(TTC)n |
Simple_repeat |
| scaffold10637 |
19646 |
19726 |
+ |
RS9479 |
Unspecified |
| scaffold10637 |
19723 |
19820 |
+ |
RS9567 |
Unspecified |
| scaffold10637 |
21846 |
21873 |
+ |
(T)n |
Simple_repeat |
| scaffold10637 |
22493 |
22649 |
- |
RS38 |
Unspecified |
| scaffold10637 |
23176 |
23198 |
+ |
(A)n |
Simple_repeat |
| scaffold10637 |
23661 |
23711 |
+ |
(TATT)n |
Simple_repeat |
| scaffold10637 |
26402 |
26442 |
+ |
(TCTTATG)n |
Simple_repeat |
| scaffold10637 |
29688 |
29867 |
- |
RS179 |
Unspecified |
| scaffold10637 |
30722 |
30756 |
+ |
(ACAAA)n |
Simple_repeat |
| scaffold10637 |
32142 |
32165 |
+ |
(ATT)n |
Simple_repeat |
| scaffold10637 |
32187 |
32218 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
32505 |
32556 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
32576 |
32642 |
+ |
(T)n |
Simple_repeat |
| scaffold10637 |
32665 |
32767 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
32800 |
32833 |
+ |
(T)n |
Simple_repeat |
| scaffold10637 |
33273 |
33326 |
- |
RS342 |
Unspecified |
| scaffold10637 |
33604 |
33696 |
- |
RS4475 |
Unspecified |
| scaffold10637 |
35783 |
35802 |
+ |
(A)n |
Simple_repeat |
| scaffold10637 |
37663 |
37706 |
+ |
(A)n |
Simple_repeat |
| scaffold10637 |
39173 |
39205 |
+ |
(A)n |
Simple_repeat |
| scaffold10637 |
40831 |
40857 |
+ |
(A)n |
Simple_repeat |
| scaffold10637 |
41884 |
41918 |
+ |
(AC)n |
Simple_repeat |
| scaffold10637 |
43646 |
43673 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold10637 |
47536 |
47564 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold10637 |
51116 |
51149 |
+ |
(AAAAAT)n |
Simple_repeat |
| scaffold10637 |
51979 |
52066 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
52602 |
52652 |
+ |
(A)n |
Simple_repeat |
| scaffold10637 |
53320 |
53350 |
+ |
(A)n |
Simple_repeat |
| scaffold10637 |
54375 |
54437 |
+ |
(TCA)n |
Simple_repeat |
| scaffold10637 |
54438 |
54500 |
+ |
(CAA)n |
Simple_repeat |
| scaffold10637 |
54681 |
54717 |
+ |
(GCG)n |
Simple_repeat |
| scaffold10637 |
54757 |
54777 |
+ |
(AGG)n |
Simple_repeat |
| scaffold10637 |
55122 |
55313 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold10637 |
56151 |
56205 |
+ |
RS18052 |
Unspecified |
| scaffold10637 |
58198 |
58257 |
+ |
Gypsy-99_ZM-I |
LTR/Gypsy |
| scaffold10637 |
60485 |
60513 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold10637 |
60713 |
60756 |
+ |
PL198 |
Unspecified |
| scaffold10637 |
61286 |
61318 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
61396 |
61471 |
- |
Helitron1_ZM |
RC/Helitron |
| scaffold10637 |
61464 |
61791 |
- |
RS546 |
Unspecified |
| scaffold10637 |
61802 |
61831 |
+ |
(T)n |
Simple_repeat |
| scaffold10637 |
61875 |
61972 |
- |
RS16382 |
Unspecified |
| scaffold10637 |
62016 |
62268 |
- |
RS5208 |
Unspecified |
| scaffold10637 |
63920 |
63958 |
+ |
LINE1-47_ZM |
LINE/L1 |
| scaffold10637 |
64570 |
64646 |
+ |
L1-5_GM |
LINE/L1 |
| scaffold10637 |
64853 |
65965 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold10637 |
67005 |
67149 |
+ |
PL214 |
Unspecified |
| scaffold10637 |
67287 |
67456 |
+ |
RS12630 |
Unspecified |
| scaffold10637 |
67500 |
67659 |
+ |
RS11843 |
Unspecified |
| scaffold10637 |
68615 |
68711 |
- |
RS58 |
Unspecified |
| scaffold10637 |
69032 |
69135 |
- |
RS1625 |
Unspecified |
| scaffold10637 |
69423 |
69451 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold10637 |
71426 |
71935 |
- |
RS403 |
Unspecified |
| scaffold10637 |
72130 |
72212 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold10637 |
72214 |
72368 |
+ |
(GTATTT)n |
Simple_repeat |
| scaffold10637 |
72372 |
72885 |
- |
PL487 |
Unspecified |
| scaffold10637 |
72911 |
72981 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold10637 |
73392 |
73869 |
+ |
PL919 |
Unspecified |
| scaffold10637 |
73871 |
73972 |
- |
PL874 |
Unspecified |
| scaffold10637 |
74134 |
74175 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold10637 |
74443 |
74525 |
+ |
RS8684 |
Unspecified |
| scaffold10637 |
74580 |
74623 |
+ |
RS8684 |
Unspecified |
| scaffold10637 |
74823 |
74927 |
+ |
RS13372 |
Unspecified |
| scaffold10637 |
74937 |
75095 |
- |
RS1357 |
Unspecified |
| scaffold10637 |
74960 |
75091 |
+ |
RS2655 |
Unspecified |
| scaffold10637 |
74972 |
75128 |
+ |
RS1052 |
Unspecified |
| scaffold10637 |
75301 |
75330 |
+ |
GA-rich |
Low_complexity |
| scaffold10637 |
75468 |
75588 |
+ |
(TGT)n |
Simple_repeat |
| scaffold10637 |
75602 |
75644 |
+ |
GA-rich |
Low_complexity |
| scaffold10637 |
76092 |
76127 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
76184 |
76332 |
- |
RS1357 |
Unspecified |
| scaffold10637 |
76204 |
76348 |
+ |
RS3036 |
Unspecified |
| scaffold10637 |
76215 |
76367 |
+ |
RS12246 |
Unspecified |
| scaffold10637 |
76752 |
76847 |
+ |
(TGT)n |
Simple_repeat |
| scaffold10637 |
77377 |
77403 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold10637 |
77527 |
77587 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold10637 |
77887 |
77941 |
+ |
A-rich |
Low_complexity |
| scaffold10637 |
78563 |
79118 |
- |
RS902 |
Unspecified |
| scaffold10637 |
79053 |
79572 |
+ |
RS13 |
Unspecified |