scaffold10708 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold10708 |
7 |
97 |
- |
RS1984 |
Unspecified |
scaffold10708 |
152 |
344 |
+ |
RS594 |
Unspecified |
scaffold10708 |
514 |
530 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
1143 |
1259 |
+ |
PL110 |
Unspecified |
scaffold10708 |
1143 |
1283 |
- |
PL343 |
Unspecified |
scaffold10708 |
1255 |
1374 |
+ |
RS1848 |
Unspecified |
scaffold10708 |
4499 |
4728 |
+ |
RS4594 |
Unspecified |
scaffold10708 |
5157 |
5480 |
- |
RS892 |
Unspecified |
scaffold10708 |
5397 |
5508 |
- |
RS2069 |
Unspecified |
scaffold10708 |
5456 |
5578 |
+ |
RS5131 |
Unspecified |
scaffold10708 |
5741 |
5863 |
+ |
RS13929 |
Unspecified |
scaffold10708 |
5769 |
5862 |
- |
RS16382 |
Unspecified |
scaffold10708 |
6358 |
6786 |
- |
RS3974 |
Unspecified |
scaffold10708 |
6956 |
7000 |
+ |
A-rich |
Low_complexity |
scaffold10708 |
7601 |
7621 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
7763 |
7866 |
+ |
PL288 |
Unspecified |
scaffold10708 |
8240 |
8486 |
+ |
TIP100 |
DNA/hAT-Tip100 |
scaffold10708 |
8771 |
9361 |
+ |
RS132 |
Unspecified |
scaffold10708 |
9347 |
9446 |
+ |
RS8 |
Unspecified |
scaffold10708 |
11896 |
11952 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
13504 |
13629 |
+ |
Copia-42_ST-I |
LTR/Copia |
scaffold10708 |
14862 |
15037 |
+ |
RS8224 |
Unspecified |
scaffold10708 |
17335 |
17603 |
+ |
RS1 |
Unspecified |
scaffold10708 |
17965 |
17986 |
+ |
(A)n |
Simple_repeat |
scaffold10708 |
18300 |
18396 |
- |
RS1799 |
Unspecified |
scaffold10708 |
19154 |
19195 |
+ |
(TGATATT)n |
Simple_repeat |
scaffold10708 |
19524 |
19663 |
- |
RS1812 |
Unspecified |
scaffold10708 |
19792 |
19861 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold10708 |
19862 |
20065 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold10708 |
20159 |
20254 |
- |
RS17699 |
Unspecified |
scaffold10708 |
20171 |
20410 |
+ |
PL232 |
Unspecified |
scaffold10708 |
20489 |
20531 |
+ |
(TTC)n |
Simple_repeat |
scaffold10708 |
20819 |
21133 |
+ |
PL439 |
Unspecified |
scaffold10708 |
21308 |
21439 |
- |
RS14624 |
Unspecified |
scaffold10708 |
21434 |
21607 |
+ |
RS8224 |
Unspecified |
scaffold10708 |
21628 |
21692 |
+ |
RS10 |
Unspecified |
scaffold10708 |
21818 |
21958 |
- |
RS1812 |
Unspecified |
scaffold10708 |
22476 |
22837 |
+ |
PL582 |
Unspecified |
scaffold10708 |
22871 |
22891 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
22920 |
23079 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold10708 |
23180 |
23250 |
+ |
(TAT)n |
Simple_repeat |
scaffold10708 |
23251 |
23272 |
+ |
(A)n |
Simple_repeat |
scaffold10708 |
23636 |
23730 |
- |
RS16382 |
Unspecified |
scaffold10708 |
23976 |
24217 |
- |
RS15131 |
Unspecified |
scaffold10708 |
24316 |
24389 |
+ |
(TATCTA)n |
Simple_repeat |
scaffold10708 |
25308 |
25572 |
- |
RS10 |
Unspecified |
scaffold10708 |
25613 |
25704 |
+ |
(ATAT)n |
Simple_repeat |
scaffold10708 |
25964 |
26024 |
+ |
(GATATT)n |
Simple_repeat |
scaffold10708 |
26047 |
26233 |
+ |
RS7915 |
Unspecified |
scaffold10708 |
27208 |
27340 |
- |
RS9486 |
Unspecified |
scaffold10708 |
27827 |
28008 |
+ |
RS870 |
Unspecified |
scaffold10708 |
28091 |
28122 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
28341 |
28392 |
+ |
(TTATT)n |
Simple_repeat |
scaffold10708 |
29530 |
29561 |
+ |
(ATATTAGT)n |
Simple_repeat |
scaffold10708 |
29562 |
29598 |
+ |
(AT)n |
Simple_repeat |
scaffold10708 |
29769 |
30009 |
- |
RS8878 |
Unspecified |
scaffold10708 |
31033 |
31191 |
- |
RS12327 |
Unspecified |
scaffold10708 |
31417 |
31434 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
31531 |
31557 |
+ |
(A)n |
Simple_repeat |
scaffold10708 |
31750 |
31781 |
+ |
(TTCA)n |
Simple_repeat |
scaffold10708 |
31974 |
32000 |
+ |
(ATT)n |
Simple_repeat |
scaffold10708 |
32471 |
32647 |
+ |
RS7915 |
Unspecified |
scaffold10708 |
33320 |
33340 |
+ |
(A)n |
Simple_repeat |
scaffold10708 |
33899 |
33934 |
+ |
(TTTTA)n |
Simple_repeat |
scaffold10708 |
34229 |
34269 |
+ |
(AATTTAT)n |
Simple_repeat |
scaffold10708 |
34613 |
34745 |
- |
RS9486 |
Unspecified |
scaffold10708 |
34979 |
35060 |
+ |
A-rich |
Low_complexity |
scaffold10708 |
35337 |
35454 |
+ |
RS11149 |
Unspecified |
scaffold10708 |
35486 |
36467 |
- |
RS7862 |
Unspecified |
scaffold10708 |
36688 |
36736 |
- |
PL700 |
Unspecified |
scaffold10708 |
36736 |
36958 |
+ |
RS908 |
Unspecified |
scaffold10708 |
36768 |
36983 |
- |
PL700 |
Unspecified |
scaffold10708 |
36961 |
37005 |
- |
PL700 |
Unspecified |
scaffold10708 |
37129 |
37313 |
- |
RS13961 |
Unspecified |
scaffold10708 |
37962 |
38348 |
- |
RS13707 |
Unspecified |
scaffold10708 |
38741 |
38769 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
38982 |
39217 |
+ |
Copia-10_ST-I |
LTR/Copia |
scaffold10708 |
39999 |
40402 |
+ |
Copia-1_PTri-I |
LTR/Copia |
scaffold10708 |
40447 |
41855 |
+ |
Copia-1_PTri-I |
LTR/Copia |
scaffold10708 |
42250 |
42429 |
+ |
RS9797 |
Unspecified |
scaffold10708 |
42323 |
42516 |
+ |
RS14654 |
Unspecified |
scaffold10708 |
46012 |
46187 |
+ |
(ATATATT)n |
Simple_repeat |
scaffold10708 |
46107 |
46187 |
+ |
(ATATATT)n |
Simple_repeat |
scaffold10708 |
47148 |
47262 |
+ |
RS8878 |
Unspecified |
scaffold10708 |
47814 |
48025 |
- |
RS488 |
Unspecified |
scaffold10708 |
48307 |
48357 |
+ |
GA-rich |
Low_complexity |
scaffold10708 |
48382 |
48657 |
- |
RS12433 |
Unspecified |
scaffold10708 |
48751 |
49173 |
- |
RS2034 |
Unspecified |
scaffold10708 |
49146 |
49180 |
- |
RS2034 |
Unspecified |
scaffold10708 |
49196 |
49328 |
- |
RS9486 |
Unspecified |
scaffold10708 |
49943 |
50063 |
+ |
RS11149 |
Unspecified |
scaffold10708 |
50099 |
51076 |
- |
RS7862 |
Unspecified |
scaffold10708 |
51492 |
51672 |
- |
RS13961 |
Unspecified |
scaffold10708 |
52558 |
52944 |
- |
RS13707 |
Unspecified |
scaffold10708 |
53582 |
53847 |
+ |
Copia-24_ST-I |
LTR/Copia |
scaffold10708 |
54588 |
54991 |
+ |
Copia-61_ST-I |
LTR/Copia |
scaffold10708 |
55036 |
56096 |
+ |
Copia-61_ST-I |
LTR/Copia |
scaffold10708 |
55750 |
56120 |
- |
Copia1-PTR_I-int |
LTR/Copia |
scaffold10708 |
56601 |
56676 |
+ |
(CTAAT)n |
Simple_repeat |
scaffold10708 |
56800 |
56847 |
+ |
A-rich |
Low_complexity |
scaffold10708 |
57797 |
58194 |
+ |
PL469 |
Unspecified |
scaffold10708 |
58181 |
58309 |
+ |
RS385 |
Unspecified |
scaffold10708 |
58327 |
58553 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold10708 |
59811 |
59876 |
+ |
(TAATT)n |
Simple_repeat |
scaffold10708 |
60535 |
60629 |
+ |
RS9061 |
Unspecified |
scaffold10708 |
60651 |
60733 |
+ |
(GACCC)n |
Simple_repeat |
scaffold10708 |
60812 |
60917 |
- |
RS4 |
Unspecified |
scaffold10708 |
60911 |
60950 |
- |
RS4 |
Unspecified |
scaffold10708 |
61001 |
61042 |
+ |
(ATTGG)n |
Simple_repeat |
scaffold10708 |
61416 |
61576 |
+ |
RS35 |
Unspecified |
scaffold10708 |
62045 |
62098 |
+ |
(TTTAACT)n |
Simple_repeat |
scaffold10708 |
62830 |
62862 |
+ |
(AAG)n |
Simple_repeat |
scaffold10708 |
62863 |
63137 |
+ |
RS586 |
Unspecified |
scaffold10708 |
64016 |
64076 |
+ |
(CACACT)n |
Simple_repeat |
scaffold10708 |
64083 |
64326 |
+ |
RS47 |
Unspecified |
scaffold10708 |
65007 |
65049 |
+ |
(ACTCAC)n |
Simple_repeat |
scaffold10708 |
65221 |
65260 |
+ |
(TTCGTCC)n |
Simple_repeat |
scaffold10708 |
65439 |
65786 |
+ |
RS13658 |
Unspecified |
scaffold10708 |
65943 |
65982 |
+ |
A-rich |
Low_complexity |
scaffold10708 |
70669 |
70758 |
+ |
Copia-84_ST-I |
LTR/Copia |
scaffold10708 |
71579 |
71585 |
+ |
(TTTTCT)n |
Simple_repeat |
scaffold10708 |
71586 |
71615 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
72096 |
72317 |
- |
RS5608 |
Unspecified |
scaffold10708 |
73120 |
73599 |
+ |
RS621 |
Unspecified |
scaffold10708 |
74022 |
74158 |
+ |
RS9061 |
Unspecified |
scaffold10708 |
74022 |
74186 |
- |
RS222 |
Unspecified |
scaffold10708 |
74220 |
74303 |
+ |
RS11483 |
Unspecified |
scaffold10708 |
74311 |
74342 |
+ |
(AAT)n |
Simple_repeat |
scaffold10708 |
74360 |
74408 |
+ |
(TCCTAT)n |
Simple_repeat |
scaffold10708 |
74644 |
75063 |
+ |
PL3 |
Unspecified |
scaffold10708 |
75380 |
75621 |
- |
RS8878 |
Unspecified |
scaffold10708 |
76065 |
76274 |
+ |
RS12936 |
Unspecified |
scaffold10708 |
76775 |
76809 |
+ |
A-rich |
Low_complexity |
scaffold10708 |
76858 |
77013 |
+ |
RS361 |
Unspecified |
scaffold10708 |
77004 |
77115 |
- |
RS212 |
Unspecified |
scaffold10708 |
77293 |
77318 |
+ |
(AGT)n |
Simple_repeat |
scaffold10708 |
78992 |
79157 |
- |
RS8878 |
Unspecified |
scaffold10708 |
79177 |
79319 |
- |
RS4252 |
Unspecified |
scaffold10708 |
80241 |
80279 |
+ |
(TATTTT)n |
Simple_repeat |
scaffold10708 |
81078 |
81102 |
+ |
(AT)n |
Simple_repeat |
scaffold10708 |
82128 |
82164 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
82207 |
82432 |
+ |
RS8878 |
Unspecified |
scaffold10708 |
82991 |
83203 |
- |
RS488 |
Unspecified |
scaffold10708 |
83273 |
83470 |
- |
RS15697 |
Unspecified |
scaffold10708 |
83306 |
83569 |
+ |
RS68 |
Unspecified |
scaffold10708 |
83306 |
83504 |
- |
RS757 |
Unspecified |
scaffold10708 |
83339 |
83571 |
+ |
RS13348 |
Unspecified |
scaffold10708 |
83653 |
83672 |
+ |
(TTA)n |
Simple_repeat |
scaffold10708 |
85185 |
85236 |
+ |
(CAC)n |
Simple_repeat |
scaffold10708 |
85902 |
86260 |
- |
RS7739 |
Unspecified |
scaffold10708 |
86363 |
86504 |
+ |
RS11625 |
Unspecified |
scaffold10708 |
86567 |
87011 |
+ |
RS10655 |
Unspecified |
scaffold10708 |
87086 |
87299 |
+ |
RS12675 |
Unspecified |
scaffold10708 |
87394 |
87555 |
- |
RS9677 |
Unspecified |
scaffold10708 |
89608 |
89628 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
89878 |
89960 |
+ |
(TTTAATT)n |
Simple_repeat |
scaffold10708 |
92879 |
92918 |
+ |
(TTA)n |
Simple_repeat |
scaffold10708 |
93626 |
93653 |
+ |
(A)n |
Simple_repeat |
scaffold10708 |
94689 |
94828 |
+ |
PL380 |
Unspecified |
scaffold10708 |
96595 |
96613 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
97274 |
97337 |
+ |
(TAATTA)n |
Simple_repeat |
scaffold10708 |
97562 |
97578 |
+ |
(TGG)n |
Simple_repeat |
scaffold10708 |
98131 |
98526 |
- |
RS1010 |
Unspecified |
scaffold10708 |
98907 |
98945 |
+ |
(ATTATGA)n |
Simple_repeat |
scaffold10708 |
99828 |
99849 |
+ |
(A)n |
Simple_repeat |
scaffold10708 |
100416 |
100451 |
+ |
(AT)n |
Simple_repeat |
scaffold10708 |
100770 |
100975 |
+ |
RS586 |
Unspecified |
scaffold10708 |
101899 |
102109 |
+ |
RS4 |
Unspecified |
scaffold10708 |
102929 |
102951 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
103553 |
103580 |
+ |
(ATAA)n |
Simple_repeat |
scaffold10708 |
105760 |
105801 |
+ |
A-rich |
Low_complexity |
scaffold10708 |
106149 |
106272 |
+ |
RS12489 |
Unspecified |
scaffold10708 |
106606 |
106788 |
+ |
RS13641 |
Unspecified |
scaffold10708 |
106955 |
107071 |
+ |
RS13548 |
Unspecified |
scaffold10708 |
109571 |
109648 |
+ |
(ATT)n |
Simple_repeat |
scaffold10708 |
109728 |
109789 |
+ |
(ATAA)n |
Simple_repeat |
scaffold10708 |
109921 |
109948 |
+ |
(AAATT)n |
Simple_repeat |
scaffold10708 |
110235 |
110288 |
+ |
(TAA)n |
Simple_repeat |
scaffold10708 |
110388 |
110468 |
+ |
(TT)n |
Simple_repeat |
scaffold10708 |
111032 |
111081 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
113730 |
113770 |
+ |
GA-rich |
Low_complexity |
scaffold10708 |
113776 |
113901 |
- |
RS187 |
Unspecified |
scaffold10708 |
114886 |
114927 |
+ |
GA-rich |
Low_complexity |
scaffold10708 |
114945 |
114995 |
+ |
GA-rich |
Low_complexity |
scaffold10708 |
115312 |
115352 |
+ |
GA-rich |
Low_complexity |
scaffold10708 |
115358 |
115474 |
- |
RS187 |
Unspecified |
scaffold10708 |
116171 |
116262 |
+ |
(TTATTT)n |
Simple_repeat |
scaffold10708 |
116373 |
116404 |
+ |
(TTAA)n |
Simple_repeat |
scaffold10708 |
116411 |
116505 |
- |
RS16382 |
Unspecified |
scaffold10708 |
116508 |
116685 |
+ |
RS8981 |
Unspecified |
scaffold10708 |
116544 |
116754 |
- |
RS10995 |
Unspecified |
scaffold10708 |
117026 |
117671 |
- |
RS257 |
Unspecified |
scaffold10708 |
117667 |
117926 |
- |
RS109 |
Unspecified |
scaffold10708 |
117924 |
118318 |
- |
RS257 |
Unspecified |
scaffold10708 |
118424 |
118457 |
+ |
(TGT)n |
Simple_repeat |
scaffold10708 |
118485 |
118501 |
+ |
(ACA)n |
Simple_repeat |
scaffold10708 |
118502 |
118589 |
+ |
(AAT)n |
Simple_repeat |
scaffold10708 |
118593 |
118667 |
+ |
(TATAT)n |
Simple_repeat |
scaffold10708 |
119028 |
119062 |
+ |
(TTAAT)n |
Simple_repeat |
scaffold10708 |
119473 |
119528 |
- |
RS73 |
Unspecified |
scaffold10708 |
119513 |
119568 |
+ |
RS73 |
Unspecified |
scaffold10708 |
119787 |
119817 |
+ |
(TTAATA)n |
Simple_repeat |
scaffold10708 |
120114 |
120208 |
+ |
LT1_EPa |
LTR? |
scaffold10708 |
120355 |
120461 |
+ |
RS1220 |
Unspecified |
scaffold10708 |
120517 |
120611 |
+ |
LT1_EPa |
LTR? |
scaffold10708 |
121621 |
122154 |
+ |
PL473 |
Unspecified |
scaffold10708 |
122311 |
122356 |
+ |
(AT)n |
Simple_repeat |
scaffold10708 |
122371 |
122402 |
+ |
(TTTTGA)n |
Simple_repeat |
scaffold10708 |
122488 |
122528 |
+ |
(TTATACT)n |
Simple_repeat |
scaffold10708 |
122527 |
122578 |
+ |
A-rich |
Low_complexity |
scaffold10708 |
122695 |
122737 |
+ |
(TTCCT)n |
Simple_repeat |
scaffold10708 |
123056 |
123075 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
124108 |
124606 |
- |
RS527 |
Unspecified |
scaffold10708 |
125026 |
125048 |
+ |
(A)n |
Simple_repeat |
scaffold10708 |
125097 |
125122 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
125125 |
125147 |
+ |
(A)n |
Simple_repeat |
scaffold10708 |
125302 |
125309 |
+ |
(TAA)n |
Simple_repeat |
scaffold10708 |
125310 |
125357 |
+ |
A-rich |
Low_complexity |
scaffold10708 |
125358 |
125376 |
+ |
(TAA)n |
Simple_repeat |
scaffold10708 |
125613 |
125651 |
+ |
G-rich |
Low_complexity |
scaffold10708 |
126112 |
126154 |
+ |
(T)n |
Simple_repeat |
scaffold10708 |
126359 |
126436 |
+ |
(ATAACATA)n |
Simple_repeat |
scaffold10708 |
126524 |
126590 |
- |
RS1534 |
Unspecified |
scaffold10708 |
126594 |
127029 |
- |
PL673 |
Unspecified |
scaffold10708 |
126763 |
127118 |
+ |
RS4950 |
Unspecified |
scaffold10708 |
127428 |
128647 |
- |
Copia-66_GM-I |
LTR/Copia |
scaffold10708 |
129117 |
129164 |
+ |
(TCAA)n |
Simple_repeat |
scaffold10708 |
129932 |
130027 |
+ |
(TCGTAT)n |
Simple_repeat |
scaffold10708 |
130132 |
130642 |
- |
PL487 |
Unspecified |
scaffold10708 |
130665 |
130738 |
+ |
(TTTA)n |
Simple_repeat |
scaffold10708 |
131434 |
131468 |
+ |
A-rich |
Low_complexity |
scaffold10708 |
131821 |
131886 |
+ |
(TTTATG)n |
Simple_repeat |
scaffold10708 |
131970 |
132000 |
+ |
GA-rich |
Low_complexity |
scaffold10708 |
133509 |
133600 |
+ |
Copia-36_BD-I |
LTR/Copia |
scaffold10708 |
133837 |
133877 |
+ |
A-rich |
Low_complexity |
scaffold10708 |
133968 |
134294 |
+ |
GmCOPIA10_I-int |
LTR/Copia |
scaffold10708 |
134899 |
135858 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold10708 |
135932 |
137104 |
+ |
Copia-68_GM-I |
LTR/Copia |
scaffold10708 |
138328 |
139400 |
+ |
GmCOPIA10_I-int |
LTR/Copia |
scaffold10708 |
138328 |
139497 |
+ |
GmCOPIA10_I-int |
LTR/Copia |
scaffold10708 |
139322 |
139497 |
+ |
RS1807 |
Unspecified |