scaffold10795 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold10795 |
698 |
800 |
+ |
A-rich |
Low_complexity |
| scaffold10795 |
1510 |
2807 |
+ |
RS357 |
Unspecified |
| scaffold10795 |
3623 |
4417 |
- |
RS869 |
Unspecified |
| scaffold10795 |
4501 |
5033 |
- |
RS30 |
Unspecified |
| scaffold10795 |
5028 |
5068 |
- |
PL423 |
Unspecified |
| scaffold10795 |
5069 |
5618 |
- |
PL918 |
Unspecified |
| scaffold10795 |
5683 |
5773 |
+ |
RS57 |
Unspecified |
| scaffold10795 |
5771 |
6456 |
+ |
RS57 |
Unspecified |
| scaffold10795 |
6637 |
6664 |
+ |
(AATC)n |
Simple_repeat |
| scaffold10795 |
7411 |
7452 |
+ |
(TTTTATA)n |
Simple_repeat |
| scaffold10795 |
7525 |
7850 |
+ |
RS5643 |
Unspecified |
| scaffold10795 |
7560 |
8289 |
- |
PL894 |
Unspecified |
| scaffold10795 |
7981 |
8026 |
+ |
(TA)n |
Simple_repeat |
| scaffold10795 |
8124 |
8870 |
+ |
PL344 |
Unspecified |
| scaffold10795 |
8547 |
8953 |
+ |
RS2963 |
Unspecified |
| scaffold10795 |
9192 |
9365 |
- |
RS1357 |
Unspecified |
| scaffold10795 |
9219 |
9354 |
+ |
RS2655 |
Unspecified |
| scaffold10795 |
9237 |
9442 |
+ |
(GGCAGA)n |
Simple_repeat |
| scaffold10795 |
9388 |
9442 |
+ |
(GGCAGA)n |
Simple_repeat |
| scaffold10795 |
9657 |
9692 |
+ |
(GGT)n |
Simple_repeat |
| scaffold10795 |
9785 |
9849 |
+ |
(TGT)n |
Simple_repeat |
| scaffold10795 |
9850 |
9920 |
+ |
(TTA)n |
Simple_repeat |
| scaffold10795 |
9921 |
9966 |
+ |
(TGT)n |
Simple_repeat |
| scaffold10795 |
9967 |
10021 |
+ |
(TGTTG)n |
Simple_repeat |
| scaffold10795 |
10037 |
10074 |
+ |
GA-rich |
Low_complexity |
| scaffold10795 |
10270 |
10368 |
+ |
(ATAATTT)n |
Simple_repeat |
| scaffold10795 |
13036 |
13063 |
+ |
(A)n |
Simple_repeat |
| scaffold10795 |
13287 |
13322 |
+ |
(T)n |
Simple_repeat |
| scaffold10795 |
18854 |
18964 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold10795 |
19688 |
19718 |
+ |
(ATATTA)n |
Simple_repeat |
| scaffold10795 |
22228 |
22261 |
+ |
(TAA)n |
Simple_repeat |
| scaffold10795 |
25721 |
25749 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold10795 |
30017 |
31006 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold10795 |
31173 |
31478 |
+ |
ATGP3B_I-int |
LTR/Gypsy |
| scaffold10795 |
31455 |
31972 |
+ |
ATGP3B_I-int |
LTR/Gypsy |
| scaffold10795 |
32142 |
32165 |
+ |
(TC)n |
Simple_repeat |
| scaffold10795 |
37095 |
37132 |
+ |
(CTTTCA)n |
Simple_repeat |
| scaffold10795 |
38002 |
38028 |
+ |
(CAC)n |
Simple_repeat |
| scaffold10795 |
38072 |
38102 |
+ |
(ACA)n |
Simple_repeat |
| scaffold10795 |
39898 |
41183 |
+ |
HELMET4 |
RC/Helitron |
| scaffold10795 |
43799 |
43869 |
+ |
(TTTTGAA)n |
Simple_repeat |
| scaffold10795 |
45198 |
45229 |
+ |
(CACTTGT)n |
Simple_repeat |
| scaffold10795 |
46446 |
46470 |
+ |
(GA)n |
Simple_repeat |
| scaffold10795 |
53754 |
53802 |
+ |
(T)n |
Simple_repeat |
| scaffold10795 |
58358 |
58418 |
+ |
(AATCATT)n |
Simple_repeat |
| scaffold10795 |
58676 |
58736 |
+ |
A-rich |
Low_complexity |
| scaffold10795 |
58827 |
58919 |
+ |
(TAATATC)n |
Simple_repeat |
| scaffold10795 |
61174 |
61221 |
+ |
(AATAAC)n |
Simple_repeat |
| scaffold10795 |
61577 |
61644 |
+ |
(TTAATTA)n |
Simple_repeat |
| scaffold10795 |
61745 |
61801 |
+ |
RS470 |
Unspecified |
| scaffold10795 |
61973 |
62010 |
+ |
(ATA)n |
Simple_repeat |
| scaffold10795 |
62309 |
62331 |
+ |
(T)n |
Simple_repeat |
| scaffold10795 |
63894 |
63914 |
+ |
(T)n |
Simple_repeat |
| scaffold10795 |
65939 |
65984 |
+ |
(GGTTC)n |
Simple_repeat |
| scaffold10795 |
66190 |
66231 |
+ |
(T)n |
Simple_repeat |
| scaffold10795 |
66516 |
68432 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold10795 |
67190 |
67849 |
+ |
MuDR-8_VV |
DNA/MULE-MuDR |
| scaffold10795 |
68286 |
68351 |
+ |
MuDR-22_VV |
DNA/MULE-MuDR |
| scaffold10795 |
68720 |
69141 |
+ |
PL594 |
Unspecified |
| scaffold10795 |
69575 |
69621 |
+ |
RS17954 |
Unspecified |
| scaffold10795 |
71907 |
71934 |
+ |
(GTA)n |
Simple_repeat |
| scaffold10795 |
72757 |
72817 |
+ |
(T)n |
Simple_repeat |
| scaffold10795 |
74021 |
74797 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold10795 |
74531 |
74569 |
+ |
(CAATTTT)n |
Simple_repeat |
| scaffold10795 |
75383 |
76066 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold10795 |
75460 |
75795 |
- |
Copia10-VV_I-int |
LTR/Copia |
| scaffold10795 |
78112 |
78133 |
+ |
(AATG)n |
Simple_repeat |
| scaffold10795 |
78187 |
78245 |
+ |
(AAATACG)n |
Simple_repeat |
| scaffold10795 |
78363 |
78405 |
- |
Gypsy-137_SBi-I |
LTR/Gypsy |
| scaffold10795 |
78453 |
79770 |
- |
Gypsy-78_PTr-I |
LTR/Gypsy |
| scaffold10795 |
79950 |
80387 |
- |
Gypsy-39_Mad-I |
LTR/Gypsy |
| scaffold10795 |
80368 |
80421 |
- |
RLG_scDEL_1_4-I |
LTR/Gypsy |
| scaffold10795 |
80806 |
80943 |
+ |
(ATC)n |
Simple_repeat |
| scaffold10795 |
80806 |
81111 |
+ |
(ATC)n |
Simple_repeat |
| scaffold10795 |
80900 |
81111 |
+ |
RS17462 |
Unspecified |
| scaffold10795 |
83170 |
83218 |
+ |
RS17610 |
Unspecified |
| scaffold10795 |
83181 |
83330 |
+ |
RS17610 |
Unspecified |
| scaffold10795 |
83434 |
83476 |
+ |
(AACTA)n |
Simple_repeat |
| scaffold10795 |
83664 |
83800 |
+ |
RS15873 |
Unspecified |
| scaffold10795 |
84066 |
84252 |
+ |
RS14805 |
Unspecified |
| scaffold10795 |
84359 |
84756 |
+ |
RS16072 |
Unspecified |
| scaffold10795 |
84812 |
85600 |
+ |
RS17590 |
Unspecified |
| scaffold10795 |
85601 |
85968 |
+ |
RS11869 |
Unspecified |
| scaffold10795 |
85847 |
85985 |
+ |
RS15526 |
Unspecified |
| scaffold10795 |
86171 |
86257 |
+ |
PL870 |
Unspecified |
| scaffold10795 |
86189 |
86263 |
+ |
RS481 |
Unspecified |
| scaffold10795 |
86473 |
86519 |
+ |
RS4754 |
Unspecified |
| scaffold10795 |
87908 |
87977 |
+ |
Gypsy-27_Mad-I |
LTR/Gypsy |
| scaffold10795 |
87945 |
87991 |
+ |
Gypsy-17_GM-I |
LTR/Gypsy |
| scaffold10795 |
88192 |
91175 |
+ |
Gypsy-17_GM-I |
LTR/Gypsy |
| scaffold10795 |
91166 |
91563 |
+ |
RS16072 |
Unspecified |
| scaffold10795 |
91619 |
92407 |
+ |
RS17590 |
Unspecified |
| scaffold10795 |
92408 |
92775 |
+ |
RS11869 |
Unspecified |
| scaffold10795 |
92654 |
92792 |
+ |
RS15526 |
Unspecified |
| scaffold10795 |
93113 |
93299 |
+ |
RS14805 |
Unspecified |
| scaffold10795 |
96403 |
96487 |
- |
RS6930 |
Unspecified |
| scaffold10795 |
96573 |
96629 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold10795 |
99807 |
99845 |
+ |
(T)n |
Simple_repeat |
| scaffold10795 |
100492 |
100678 |
+ |
RS14805 |
Unspecified |
| scaffold10795 |
102677 |
102807 |
+ |
(AAT)n |
Simple_repeat |
| scaffold10795 |
102929 |
103028 |
+ |
RS17909 |
Unspecified |
| scaffold10795 |
103410 |
103475 |
+ |
(TGT)n |
Simple_repeat |
| scaffold10795 |
103528 |
103616 |
+ |
(GTT)n |
Simple_repeat |
| scaffold10795 |
104148 |
104200 |
- |
Gypsy-19_SB-I |
LTR/Gypsy |
| scaffold10795 |
104300 |
104326 |
+ |
(TTA)n |
Simple_repeat |
| scaffold10795 |
104934 |
104990 |
+ |
RS168 |
Unspecified |
| scaffold10795 |
105326 |
105463 |
+ |
(ATC)n |
Simple_repeat |
| scaffold10795 |
105326 |
105631 |
+ |
(ATC)n |
Simple_repeat |
| scaffold10795 |
105420 |
105631 |
+ |
RS17462 |
Unspecified |
| scaffold10795 |
107304 |
107533 |
+ |
RS17278 |
Unspecified |
| scaffold10795 |
107783 |
107826 |
+ |
(CCACTCC)n |
Simple_repeat |
| scaffold10795 |
108106 |
108292 |
+ |
(TCA)n |
Simple_repeat |
| scaffold10795 |
108313 |
108345 |
+ |
(TCCATT)n |
Simple_repeat |
| scaffold10795 |
108353 |
108517 |
+ |
RS17954 |
Unspecified |
| scaffold10795 |
108532 |
108760 |
+ |
RS17613 |
Unspecified |
| scaffold10795 |
108765 |
108964 |
+ |
RS16502 |
Unspecified |
| scaffold10795 |
109006 |
109309 |
+ |
RS17295 |
Unspecified |
| scaffold10795 |
110279 |
110327 |
+ |
(AATTTC)n |
Simple_repeat |
| scaffold10795 |
110304 |
110348 |
+ |
(AACTTCG)n |
Simple_repeat |
| scaffold10795 |
112581 |
112668 |
+ |
(TTCAAG)n |
Simple_repeat |
| scaffold10795 |
114913 |
115142 |
+ |
RS17278 |
Unspecified |
| scaffold10795 |
115392 |
115435 |
+ |
(CCACTCC)n |
Simple_repeat |
| scaffold10795 |
115715 |
115901 |
+ |
(TCA)n |
Simple_repeat |
| scaffold10795 |
115962 |
116126 |
+ |
RS17954 |
Unspecified |
| scaffold10795 |
116141 |
116369 |
+ |
RS17613 |
Unspecified |
| scaffold10795 |
116375 |
116574 |
+ |
RS16502 |
Unspecified |
| scaffold10795 |
116616 |
116919 |
+ |
RS17295 |
Unspecified |
| scaffold10795 |
117296 |
117344 |
+ |
RS17610 |
Unspecified |
| scaffold10795 |
117307 |
117456 |
+ |
RS17610 |
Unspecified |
| scaffold10795 |
117560 |
117602 |
+ |
(AACTA)n |
Simple_repeat |
| scaffold10795 |
117790 |
117926 |
+ |
RS15873 |
Unspecified |
| scaffold10795 |
118587 |
118672 |
+ |
(AAT)n |
Simple_repeat |
| scaffold10795 |
118803 |
118902 |
+ |
RS17909 |
Unspecified |
| scaffold10795 |
119369 |
119397 |
+ |
GA-rich |
Low_complexity |
| scaffold10795 |
119403 |
119486 |
+ |
(GTT)n |
Simple_repeat |
| scaffold10795 |
119841 |
119906 |
+ |
(TGT)n |
Simple_repeat |
| scaffold10795 |
119959 |
120047 |
+ |
(GTT)n |
Simple_repeat |
| scaffold10795 |
120054 |
120095 |
+ |
G-rich |
Low_complexity |
| scaffold10795 |
120552 |
120635 |
- |
PL230 |
Unspecified |
| scaffold10795 |
120577 |
120635 |
+ |
PL953 |
Unspecified |
| scaffold10795 |
120734 |
120760 |
+ |
(TTA)n |
Simple_repeat |
| scaffold10795 |
121368 |
121424 |
+ |
RS168 |
Unspecified |
| scaffold10795 |
121760 |
122065 |
+ |
(ATC)n |
Simple_repeat |
| scaffold10795 |
121760 |
121897 |
+ |
(ATC)n |
Simple_repeat |
| scaffold10795 |
121854 |
122065 |
+ |
RS17462 |
Unspecified |
| scaffold10795 |
123720 |
123949 |
+ |
RS17278 |
Unspecified |
| scaffold10795 |
124199 |
124242 |
+ |
(CCACTCC)n |
Simple_repeat |
| scaffold10795 |
124522 |
124708 |
+ |
(TCA)n |
Simple_repeat |
| scaffold10795 |
124769 |
124933 |
+ |
RS17954 |
Unspecified |
| scaffold10795 |
124948 |
125176 |
+ |
RS17613 |
Unspecified |
| scaffold10795 |
125182 |
125381 |
+ |
RS16502 |
Unspecified |
| scaffold10795 |
125423 |
125726 |
+ |
RS17295 |
Unspecified |
| scaffold10795 |
126090 |
126138 |
+ |
RS17610 |
Unspecified |
| scaffold10795 |
126101 |
126250 |
+ |
RS17610 |
Unspecified |
| scaffold10795 |
126354 |
126396 |
+ |
(AACTA)n |
Simple_repeat |
| scaffold10795 |
126584 |
126720 |
+ |
RS15873 |
Unspecified |
| scaffold10795 |
127377 |
127466 |
+ |
(TAA)n |
Simple_repeat |
| scaffold10795 |
127597 |
127696 |
+ |
RS17909 |
Unspecified |
| scaffold10795 |
128163 |
128191 |
+ |
GA-rich |
Low_complexity |
| scaffold10795 |
128287 |
128328 |
+ |
G-rich |
Low_complexity |
| scaffold10795 |
128831 |
128886 |
- |
Gypsy-49_Mad-I |
LTR/Gypsy |
| scaffold10795 |
128890 |
129666 |
+ |
(CTTAACC)n |
Simple_repeat |
| scaffold10795 |
131512 |
131882 |
+ |
RS11869 |
Unspecified |
| scaffold10795 |
131775 |
131900 |
+ |
RS15526 |
Unspecified |
| scaffold10795 |
132085 |
132266 |
+ |
RS481 |
Unspecified |
| scaffold10795 |
133079 |
133186 |
+ |
Gypsy-29_SB-I |
LTR/Gypsy |
| scaffold10795 |
134331 |
134377 |
+ |
Gypsy-26_ST-I |
LTR/Gypsy |
| scaffold10795 |
136211 |
136581 |
+ |
RS11869 |
Unspecified |
| scaffold10795 |
136474 |
136599 |
+ |
RS15526 |
Unspecified |
| scaffold10795 |
136784 |
136965 |
+ |
RS481 |
Unspecified |
| scaffold10795 |
137132 |
138396 |
+ |
(CCTTAAC)n |
Simple_repeat |
| scaffold10795 |
138397 |
138658 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold10795 |
138921 |
139182 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold10795 |
139236 |
139699 |
+ |
(CTTAACC)n |
Simple_repeat |
| scaffold10795 |
139733 |
139794 |
+ |
A-rich |
Low_complexity |
| scaffold10795 |
140097 |
144355 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold10795 |
146350 |
146414 |
+ |
RS481 |
Unspecified |
| scaffold10795 |
146632 |
147698 |
+ |
(ACCCTTA)n |
Simple_repeat |
| scaffold10795 |
147909 |
147947 |
+ |
A-rich |
Low_complexity |
| scaffold10795 |
147981 |
148028 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold10795 |
148101 |
149116 |
+ |
PL66 |
Unspecified |
| scaffold10795 |
149233 |
150074 |
+ |
RS57 |
Unspecified |
| scaffold10795 |
150097 |
150178 |
+ |
(CCTTAAC)n |
Simple_repeat |
| scaffold10795 |
150621 |
150760 |
+ |
(CCCTTAA)n |
Simple_repeat |
| scaffold10795 |
152952 |
153093 |
+ |
(CCCTTAA)n |
Simple_repeat |
| scaffold10795 |
153459 |
153549 |
+ |
(TTAACCC)n |
Simple_repeat |
| scaffold10795 |
153961 |
154614 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold10795 |
155998 |
156716 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold10795 |
156889 |
157580 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold10795 |
156889 |
157542 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |