scaffold11002 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold11002 |
400 |
506 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold11002 |
2098 |
2170 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold11002 |
2268 |
2317 |
+ |
A-rich |
Low_complexity |
scaffold11002 |
2638 |
2669 |
+ |
(TTATG)n |
Simple_repeat |
scaffold11002 |
3077 |
3128 |
- |
RS3218 |
Unspecified |
scaffold11002 |
3110 |
3184 |
- |
PL942 |
Unspecified |
scaffold11002 |
5737 |
5765 |
+ |
(A)n |
Simple_repeat |
scaffold11002 |
7298 |
7349 |
+ |
(AATCA)n |
Simple_repeat |
scaffold11002 |
7796 |
8135 |
+ |
RS5888 |
Unspecified |
scaffold11002 |
7927 |
8001 |
+ |
(TAATTT)n |
Simple_repeat |
scaffold11002 |
8019 |
8049 |
+ |
(T)n |
Simple_repeat |
scaffold11002 |
8136 |
8158 |
+ |
(T)n |
Simple_repeat |
scaffold11002 |
8680 |
8946 |
+ |
RS356 |
Unspecified |
scaffold11002 |
10253 |
10314 |
+ |
RS3258 |
Unspecified |
scaffold11002 |
11225 |
11399 |
- |
LTR-1_SBi-LTR |
LTR |
scaffold11002 |
11306 |
11429 |
+ |
MIDWAY |
DNA/hAT-Tip100 |
scaffold11002 |
11599 |
11638 |
+ |
A-rich |
Low_complexity |
scaffold11002 |
11645 |
11746 |
+ |
RS15623 |
Unspecified |
scaffold11002 |
11752 |
11879 |
- |
hAT-23_ZM |
DNA/hAT-Ac |
scaffold11002 |
11927 |
11952 |
+ |
(GAACTC)n |
Simple_repeat |
scaffold11002 |
12042 |
12239 |
+ |
RS11122 |
Unspecified |
scaffold11002 |
12313 |
12399 |
+ |
RS14237 |
Unspecified |
scaffold11002 |
12534 |
12575 |
+ |
A-rich |
Low_complexity |
scaffold11002 |
12597 |
12766 |
+ |
RS15199 |
Unspecified |
scaffold11002 |
13198 |
13299 |
+ |
RS15623 |
Unspecified |
scaffold11002 |
13305 |
13432 |
- |
hAT-23_ZM |
DNA/hAT-Ac |
scaffold11002 |
13480 |
13505 |
+ |
(GAACTC)n |
Simple_repeat |
scaffold11002 |
13595 |
13792 |
+ |
RS11122 |
Unspecified |
scaffold11002 |
13866 |
13952 |
+ |
RS14237 |
Unspecified |
scaffold11002 |
14087 |
14128 |
+ |
A-rich |
Low_complexity |
scaffold11002 |
14150 |
14319 |
+ |
RS15199 |
Unspecified |
scaffold11002 |
14427 |
14444 |
+ |
(A)n |
Simple_repeat |
scaffold11002 |
14597 |
14864 |
- |
RS1658 |
Unspecified |
scaffold11002 |
15243 |
15613 |
+ |
RS17776 |
Unspecified |
scaffold11002 |
15682 |
15771 |
+ |
RS4 |
Unspecified |
scaffold11002 |
15925 |
16524 |
+ |
RS112 |
Unspecified |
scaffold11002 |
16553 |
16923 |
+ |
RS17776 |
Unspecified |
scaffold11002 |
16992 |
17081 |
+ |
RS4 |
Unspecified |
scaffold11002 |
17235 |
17307 |
+ |
RS112 |
Unspecified |
scaffold11002 |
17303 |
17793 |
+ |
RS112 |
Unspecified |
scaffold11002 |
18149 |
18274 |
- |
RS112 |
Unspecified |
scaffold11002 |
18586 |
18808 |
+ |
RS12295 |
Unspecified |
scaffold11002 |
18931 |
19056 |
- |
RS296 |
Unspecified |
scaffold11002 |
19045 |
19113 |
- |
RS965 |
Unspecified |
scaffold11002 |
19058 |
19105 |
+ |
PL886 |
Unspecified |
scaffold11002 |
19189 |
19278 |
+ |
(ATT)n |
Simple_repeat |
scaffold11002 |
19236 |
19278 |
+ |
(ATT)n |
Simple_repeat |
scaffold11002 |
20048 |
20091 |
+ |
A-rich |
Low_complexity |
scaffold11002 |
20048 |
20155 |
+ |
A-rich |
Low_complexity |
scaffold11002 |
20077 |
20175 |
+ |
(ATTG)n |
Simple_repeat |
scaffold11002 |
20145 |
20175 |
+ |
(ATTG)n |
Simple_repeat |
scaffold11002 |
20223 |
20268 |
+ |
RS429 |
Unspecified |
scaffold11002 |
20969 |
21140 |
+ |
(ATTGTGA)n |
Simple_repeat |
scaffold11002 |
21583 |
21707 |
+ |
RS16739 |
Unspecified |
scaffold11002 |
23273 |
23300 |
+ |
A-rich |
Low_complexity |
scaffold11002 |
24089 |
24260 |
+ |
(ATTGTGA)n |
Simple_repeat |
scaffold11002 |
24703 |
24827 |
+ |
RS16739 |
Unspecified |
scaffold11002 |
29000 |
29008 |
+ |
(TTAA)n |
Simple_repeat |
scaffold11002 |
29009 |
29061 |
+ |
(TAATTAA)n |
Simple_repeat |
scaffold11002 |
29062 |
29068 |
+ |
(TTAA)n |
Simple_repeat |
scaffold11002 |
29263 |
29466 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold11002 |
29586 |
30056 |
+ |
PL571 |
Unspecified |
scaffold11002 |
30391 |
30468 |
+ |
(GGC)n |
Simple_repeat |
scaffold11002 |
35161 |
35235 |
+ |
(T)n |
Simple_repeat |
scaffold11002 |
36434 |
36524 |
+ |
(GACCCA)n |
Simple_repeat |
scaffold11002 |
39928 |
40107 |
+ |
(CGA)n |
Simple_repeat |
scaffold11002 |
41953 |
42001 |
+ |
(A)n |
Simple_repeat |
scaffold11002 |
42947 |
42983 |
+ |
(TTGGTGG)n |
Simple_repeat |
scaffold11002 |
49023 |
49223 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold11002 |
49276 |
49316 |
+ |
(ATA)n |
Simple_repeat |
scaffold11002 |
49441 |
49496 |
- |
RS18380 |
Unspecified |
scaffold11002 |
50105 |
50265 |
+ |
RS7885 |
Unspecified |
scaffold11002 |
51879 |
51940 |
+ |
(ACAGAA)n |
Simple_repeat |
scaffold11002 |
52061 |
52175 |
- |
RS285 |
Unspecified |
scaffold11002 |
53022 |
53243 |
- |
RS41 |
Unspecified |
scaffold11002 |
53146 |
53256 |
+ |
RS17211 |
Unspecified |
scaffold11002 |
53249 |
53313 |
+ |
RS2106 |
Unspecified |
scaffold11002 |
53251 |
53322 |
- |
PL276 |
Unspecified |
scaffold11002 |
53450 |
53482 |
+ |
(A)n |
Simple_repeat |
scaffold11002 |
53946 |
54133 |
+ |
A-rich |
Low_complexity |
scaffold11002 |
53946 |
53974 |
+ |
A-rich |
Low_complexity |
scaffold11002 |
53971 |
54133 |
+ |
RS7885 |
Unspecified |
scaffold11002 |
54589 |
54724 |
+ |
RS17498 |
Unspecified |
scaffold11002 |
54741 |
54798 |
+ |
RS16005 |
Unspecified |
scaffold11002 |
55111 |
55171 |
- |
PIGY-I_PS |
LTR/Gypsy |
scaffold11002 |
55308 |
55690 |
+ |
RS13142 |
Unspecified |
scaffold11002 |
55748 |
56704 |
+ |
RS9377 |
Unspecified |
scaffold11002 |
57072 |
57108 |
+ |
(T)n |
Simple_repeat |
scaffold11002 |
58941 |
59069 |
+ |
RS12227 |
Unspecified |
scaffold11002 |
59200 |
59486 |
+ |
RS9514 |
Unspecified |
scaffold11002 |
59235 |
59758 |
- |
RS17019 |
Unspecified |
scaffold11002 |
59823 |
59967 |
+ |
RS12785 |
Unspecified |
scaffold11002 |
62612 |
62649 |
+ |
(GGATAT)n |
Simple_repeat |
scaffold11002 |
63192 |
63246 |
- |
RS9510 |
Unspecified |
scaffold11002 |
63209 |
63319 |
- |
RS4475 |
Unspecified |
scaffold11002 |
63218 |
63310 |
+ |
RS16382 |
Unspecified |
scaffold11002 |
63506 |
63666 |
+ |
RS7885 |
Unspecified |
scaffold11002 |
63859 |
63877 |
+ |
(T)n |
Simple_repeat |
scaffold11002 |
64179 |
64561 |
+ |
RS13142 |
Unspecified |
scaffold11002 |
64587 |
65548 |
+ |
RS9377 |
Unspecified |
scaffold11002 |
65923 |
65952 |
+ |
(T)n |
Simple_repeat |
scaffold11002 |
67873 |
68002 |
+ |
RS12227 |
Unspecified |
scaffold11002 |
68158 |
68445 |
+ |
RS9514 |
Unspecified |
scaffold11002 |
68193 |
68736 |
- |
RS17019 |
Unspecified |
scaffold11002 |
68810 |
68960 |
+ |
RS12785 |
Unspecified |
scaffold11002 |
69678 |
69853 |
+ |
RS16690 |
Unspecified |
scaffold11002 |
70080 |
70278 |
+ |
RS18001 |
Unspecified |
scaffold11002 |
70389 |
70584 |
+ |
RS15588 |
Unspecified |
scaffold11002 |
70621 |
70782 |
+ |
RS15786 |
Unspecified |
scaffold11002 |
70828 |
71054 |
+ |
RS17498 |
Unspecified |