scaffold11150 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11150 |
236 |
571 |
+ |
RS23 |
Unspecified |
| scaffold11150 |
735 |
824 |
+ |
Caulimovirus-1_PTr |
LTR/Caulimovirus |
| scaffold11150 |
1229 |
2007 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold11150 |
1229 |
1270 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold11150 |
1229 |
1869 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold11150 |
1264 |
2007 |
+ |
PL706 |
Unspecified |
| scaffold11150 |
1264 |
1869 |
- |
RS8870 |
Unspecified |
| scaffold11150 |
2242 |
2298 |
+ |
(AACA)n |
Simple_repeat |
| scaffold11150 |
4452 |
4614 |
+ |
(TAA)n |
Simple_repeat |
| scaffold11150 |
6079 |
6111 |
+ |
(ACAAG)n |
Simple_repeat |
| scaffold11150 |
6750 |
7051 |
+ |
PL874 |
Unspecified |
| scaffold11150 |
7100 |
7178 |
+ |
A-rich |
Low_complexity |
| scaffold11150 |
7467 |
7954 |
+ |
RS403 |
Unspecified |
| scaffold11150 |
7557 |
8807 |
- |
RS57 |
Unspecified |
| scaffold11150 |
7774 |
7974 |
- |
RS37 |
Unspecified |
| scaffold11150 |
8817 |
8900 |
+ |
(TTA)n |
Simple_repeat |
| scaffold11150 |
8994 |
9108 |
+ |
PL153 |
Unspecified |
| scaffold11150 |
9118 |
10804 |
- |
RS254 |
Unspecified |
| scaffold11150 |
10804 |
10950 |
- |
RS4524 |
Unspecified |
| scaffold11150 |
11006 |
11162 |
+ |
RS2496 |
Unspecified |
| scaffold11150 |
11333 |
11355 |
+ |
(T)n |
Simple_repeat |
| scaffold11150 |
11404 |
11429 |
+ |
(T)n |
Simple_repeat |
| scaffold11150 |
11462 |
11503 |
+ |
(TTTTTAC)n |
Simple_repeat |
| scaffold11150 |
11944 |
12069 |
+ |
RS356 |
Unspecified |
| scaffold11150 |
12072 |
12192 |
+ |
PL153 |
Unspecified |
| scaffold11150 |
12243 |
12516 |
- |
RS1939 |
Unspecified |
| scaffold11150 |
12339 |
12841 |
+ |
RS10981 |
Unspecified |
| scaffold11150 |
12549 |
12977 |
- |
RS4863 |
Unspecified |
| scaffold11150 |
12973 |
13040 |
+ |
(TTA)n |
Simple_repeat |
| scaffold11150 |
13108 |
13226 |
+ |
(ATA)n |
Simple_repeat |
| scaffold11150 |
13227 |
13331 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold11150 |
13367 |
13430 |
+ |
(CCG)n |
Simple_repeat |
| scaffold11150 |
15757 |
16181 |
+ |
PL233 |
Unspecified |
| scaffold11150 |
20985 |
21009 |
+ |
(T)n |
Simple_repeat |
| scaffold11150 |
22569 |
22685 |
+ |
RS712 |
Unspecified |
| scaffold11150 |
22749 |
22793 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold11150 |
23400 |
23812 |
+ |
PL673 |
Unspecified |
| scaffold11150 |
23819 |
23981 |
+ |
RS712 |
Unspecified |
| scaffold11150 |
23911 |
24206 |
+ |
RS1534 |
Unspecified |
| scaffold11150 |
24036 |
24436 |
+ |
RS4921 |
Unspecified |
| scaffold11150 |
24542 |
24566 |
+ |
(T)n |
Simple_repeat |
| scaffold11150 |
25400 |
25454 |
- |
Gypsy-23_ST-LTR |
LTR/Gypsy |
| scaffold11150 |
25553 |
25945 |
+ |
RS712 |
Unspecified |
| scaffold11150 |
25875 |
26225 |
+ |
GYZMA1_LTR |
LTR/Gypsy |
| scaffold11150 |
26154 |
26225 |
+ |
GYZMA1_LTR |
LTR/Gypsy |
| scaffold11150 |
26356 |
26461 |
+ |
RS712 |
Unspecified |
| scaffold11150 |
26391 |
26741 |
+ |
GYZMA1_LTR |
LTR/Gypsy |
| scaffold11150 |
26670 |
26741 |
+ |
GYZMA1_LTR |
LTR/Gypsy |
| scaffold11150 |
26872 |
27092 |
+ |
RS1167 |
Unspecified |
| scaffold11150 |
27091 |
27143 |
+ |
RS4921 |
Unspecified |
| scaffold11150 |
27779 |
28830 |
+ |
RS14 |
Unspecified |
| scaffold11150 |
28920 |
29018 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold11150 |
29223 |
29269 |
+ |
A-rich |
Low_complexity |
| scaffold11150 |
29567 |
30054 |
- |
PL874 |
Unspecified |
| scaffold11150 |
30125 |
30875 |
+ |
PL344 |
Unspecified |
| scaffold11150 |
30869 |
31030 |
+ |
RS7908 |
Unspecified |
| scaffold11150 |
31596 |
31716 |
+ |
(TTGTTT)n |
Simple_repeat |
| scaffold11150 |
31871 |
32009 |
+ |
PL799 |
Unspecified |
| scaffold11150 |
32135 |
32193 |
+ |
(ATTTTAT)n |
Simple_repeat |
| scaffold11150 |
32258 |
32672 |
+ |
PL799 |
Unspecified |
| scaffold11150 |
32761 |
32834 |
+ |
(TATT)n |
Simple_repeat |
| scaffold11150 |
32925 |
33032 |
+ |
RS550 |
Unspecified |
| scaffold11150 |
33093 |
33156 |
+ |
(ATA)n |
Simple_repeat |
| scaffold11150 |
34470 |
34492 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold11150 |
34493 |
34511 |
+ |
(AT)n |
Simple_repeat |
| scaffold11150 |
36486 |
36657 |
+ |
RS2979 |
Unspecified |
| scaffold11150 |
36923 |
36960 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold11150 |
37083 |
37107 |
+ |
(TG)n |
Simple_repeat |
| scaffold11150 |
37197 |
38001 |
+ |
RS550 |
Unspecified |
| scaffold11150 |
37734 |
38599 |
+ |
RS1204 |
Unspecified |
| scaffold11150 |
38601 |
39057 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold11150 |
42082 |
42680 |
+ |
PL622 |
Unspecified |
| scaffold11150 |
43496 |
43707 |
+ |
RS9337 |
Unspecified |
| scaffold11150 |
43787 |
44092 |
+ |
RS4452 |
Unspecified |
| scaffold11150 |
44158 |
44209 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold11150 |
44425 |
44794 |
+ |
RS5560 |
Unspecified |
| scaffold11150 |
44611 |
45185 |
- |
RS2912 |
Unspecified |
| scaffold11150 |
46280 |
46381 |
- |
RS10 |
Unspecified |
| scaffold11150 |
46378 |
46835 |
+ |
PL773 |
Unspecified |
| scaffold11150 |
46835 |
47008 |
- |
RS10 |
Unspecified |
| scaffold11150 |
46964 |
47014 |
+ |
RS10 |
Unspecified |
| scaffold11150 |
47023 |
47064 |
+ |
(ATAAGTCA)n |
Simple_repeat |
| scaffold11150 |
47161 |
47459 |
+ |
RS102 |
Unspecified |