scaffold11269 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11269 |
1 |
1271 |
- |
Copia-7_BRa-I |
LTR/Copia |
| scaffold11269 |
5513 |
5593 |
+ |
A-rich |
Low_complexity |
| scaffold11269 |
5747 |
5814 |
+ |
(TTT)n |
Simple_repeat |
| scaffold11269 |
5815 |
5840 |
+ |
(AATTTG)n |
Simple_repeat |
| scaffold11269 |
5878 |
6133 |
+ |
RS2218 |
Unspecified |
| scaffold11269 |
6256 |
6286 |
+ |
(AGGTGT)n |
Simple_repeat |
| scaffold11269 |
6339 |
6883 |
- |
RS524 |
Unspecified |
| scaffold11269 |
6886 |
7669 |
- |
RS524 |
Unspecified |
| scaffold11269 |
7681 |
7829 |
+ |
RS4042 |
Unspecified |
| scaffold11269 |
8147 |
8189 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold11269 |
8278 |
8328 |
+ |
(TTTAGT)n |
Simple_repeat |
| scaffold11269 |
8927 |
9085 |
+ |
RS7699 |
Unspecified |
| scaffold11269 |
9185 |
9253 |
- |
DNA-TA-1_STu |
DNA/TcMar-Stowaway |
| scaffold11269 |
9643 |
9826 |
+ |
PL699 |
Unspecified |
| scaffold11269 |
9843 |
9895 |
+ |
A-rich |
Low_complexity |
| scaffold11269 |
9939 |
10071 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold11269 |
10379 |
10461 |
+ |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold11269 |
10504 |
10538 |
+ |
(CGGGT)n |
Simple_repeat |
| scaffold11269 |
11463 |
11508 |
+ |
(AC)n |
Simple_repeat |
| scaffold11269 |
12242 |
12332 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold11269 |
13286 |
13616 |
- |
RS6631 |
Unspecified |
| scaffold11269 |
13649 |
13772 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold11269 |
13774 |
13868 |
+ |
(ATT)n |
Simple_repeat |
| scaffold11269 |
15957 |
15999 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11269 |
16030 |
16159 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold11269 |
16184 |
16355 |
- |
RS6631 |
Unspecified |
| scaffold11269 |
16830 |
16940 |
+ |
RS15629 |
Unspecified |
| scaffold11269 |
17988 |
18313 |
- |
RS1716 |
Unspecified |
| scaffold11269 |
18033 |
18403 |
- |
PL757 |
Unspecified |
| scaffold11269 |
18601 |
18645 |
+ |
GA-rich |
Low_complexity |
| scaffold11269 |
18877 |
18954 |
+ |
GA-rich |
Low_complexity |
| scaffold11269 |
19415 |
19525 |
+ |
RS15629 |
Unspecified |
| scaffold11269 |
19797 |
19960 |
- |
RS874 |
Unspecified |
| scaffold11269 |
22176 |
22193 |
+ |
(T)n |
Simple_repeat |
| scaffold11269 |
23935 |
23958 |
+ |
(A)n |
Simple_repeat |
| scaffold11269 |
24280 |
24563 |
+ |
RS1 |
Unspecified |
| scaffold11269 |
24574 |
24750 |
+ |
RS1115 |
Unspecified |
| scaffold11269 |
25620 |
25641 |
+ |
(T)n |
Simple_repeat |
| scaffold11269 |
25951 |
26086 |
+ |
(AC)n |
Simple_repeat |
| scaffold11269 |
26108 |
26130 |
+ |
(A)n |
Simple_repeat |
| scaffold11269 |
26812 |
26909 |
- |
RS549 |
Unspecified |
| scaffold11269 |
29335 |
29800 |
+ |
RS1927 |
Unspecified |
| scaffold11269 |
30118 |
30246 |
+ |
RS16189 |
Unspecified |
| scaffold11269 |
30365 |
30474 |
+ |
RS17034 |
Unspecified |
| scaffold11269 |
30491 |
30545 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold11269 |
31269 |
31659 |
- |
PL3 |
Unspecified |
| scaffold11269 |
31871 |
31895 |
+ |
(A)n |
Simple_repeat |
| scaffold11269 |
32187 |
32230 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11269 |
32429 |
32462 |
+ |
(A)n |
Simple_repeat |
| scaffold11269 |
32534 |
32645 |
+ |
RS1161 |
Unspecified |
| scaffold11269 |
32665 |
32734 |
- |
RS622 |
Unspecified |
| scaffold11269 |
32953 |
33368 |
- |
RS1351 |
Unspecified |
| scaffold11269 |
33365 |
33399 |
+ |
(TATGAT)n |
Simple_repeat |
| scaffold11269 |
33533 |
33961 |
+ |
RS941 |
Unspecified |
| scaffold11269 |
34067 |
34105 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold11269 |
34695 |
34741 |
+ |
A-rich |
Low_complexity |
| scaffold11269 |
34786 |
34833 |
+ |
(AATTACA)n |
Simple_repeat |
| scaffold11269 |
35068 |
35090 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold11269 |
35404 |
35724 |
- |
RS470 |
Unspecified |
| scaffold11269 |
35738 |
36415 |
+ |
PL529 |
Unspecified |
| scaffold11269 |
36419 |
36441 |
+ |
(AATC)n |
Simple_repeat |
| scaffold11269 |
36510 |
36554 |
+ |
(ATT)n |
Simple_repeat |
| scaffold11269 |
36575 |
37147 |
- |
PL169 |
Unspecified |
| scaffold11269 |
37237 |
37520 |
+ |
(ATTATG)n |
Simple_repeat |
| scaffold11269 |
37237 |
37283 |
+ |
(ATTATG)n |
Simple_repeat |
| scaffold11269 |
37275 |
37520 |
- |
PL169 |
Unspecified |
| scaffold11269 |
37471 |
37561 |
- |
RS861 |
Unspecified |
| scaffold11269 |
37623 |
37893 |
+ |
RS533 |
Unspecified |
| scaffold11269 |
37887 |
37948 |
- |
RS29 |
Unspecified |
| scaffold11269 |
38066 |
38340 |
- |
RS586 |
Unspecified |
| scaffold11269 |
38383 |
38753 |
+ |
PL171 |
Unspecified |
| scaffold11269 |
38508 |
38752 |
+ |
PL470 |
Unspecified |
| scaffold11269 |
39916 |
39953 |
+ |
(TAA)n |
Simple_repeat |
| scaffold11269 |
40192 |
40240 |
+ |
A-rich |
Low_complexity |
| scaffold11269 |
41330 |
41359 |
+ |
A-rich |
Low_complexity |
| scaffold11269 |
41471 |
41637 |
+ |
RS8981 |
Unspecified |
| scaffold11269 |
41496 |
41706 |
- |
RS10995 |
Unspecified |
| scaffold11269 |
42655 |
42889 |
+ |
RS12305 |
Unspecified |
| scaffold11269 |
42973 |
43017 |
+ |
A-rich |
Low_complexity |
| scaffold11269 |
43169 |
43244 |
+ |
(ATTGG)n |
Simple_repeat |
| scaffold11269 |
43381 |
43557 |
+ |
RS179 |
Unspecified |
| scaffold11269 |
43603 |
43711 |
+ |
RS10593 |
Unspecified |
| scaffold11269 |
43735 |
43823 |
+ |
(ATA)n |
Simple_repeat |
| scaffold11269 |
43735 |
43993 |
+ |
(ATA)n |
Simple_repeat |
| scaffold11269 |
43790 |
43993 |
+ |
RS6141 |
Unspecified |
| scaffold11269 |
43893 |
44008 |
+ |
RS16782 |
Unspecified |
| scaffold11269 |
44010 |
44056 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold11269 |
44339 |
44372 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold11269 |
44518 |
44581 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold11269 |
44616 |
44770 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11269 |
44616 |
44651 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11269 |
44637 |
44770 |
- |
RS549 |
Unspecified |
| scaffold11269 |
44766 |
45066 |
- |
RS2523 |
Unspecified |
| scaffold11269 |
45167 |
45213 |
+ |
(A)n |
Simple_repeat |
| scaffold11269 |
45231 |
45266 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold11269 |
46267 |
46297 |
+ |
(AATAC)n |
Simple_repeat |
| scaffold11269 |
46308 |
46637 |
- |
SHACOP12_I_MT-int |
LTR/Copia |
| scaffold11269 |
48562 |
48587 |
+ |
(T)n |
Simple_repeat |
| scaffold11269 |
49363 |
49381 |
+ |
(T)n |
Simple_repeat |
| scaffold11269 |
49481 |
49551 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold11269 |
49516 |
49552 |
+ |
(T)n |
Simple_repeat |
| scaffold11269 |
49726 |
49832 |
- |
RS418 |
Unspecified |
| scaffold11269 |
49827 |
50039 |
+ |
RS1512 |
Unspecified |
| scaffold11269 |
50047 |
50086 |
+ |
(ATTAATG)n |
Simple_repeat |
| scaffold11269 |
50469 |
50550 |
- |
RS5554 |
Unspecified |
| scaffold11269 |
50658 |
52284 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold11269 |
52725 |
54200 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold11269 |
52727 |
54005 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold11269 |
54119 |
54151 |
+ |
(CAC)n |
Simple_repeat |
| scaffold11269 |
54480 |
55089 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold11269 |
55186 |
55267 |
- |
RS5554 |
Unspecified |
| scaffold11269 |
55834 |
55943 |
+ |
RS7859 |
Unspecified |
| scaffold11269 |
56471 |
56727 |
+ |
RS1 |
Unspecified |
| scaffold11269 |
57265 |
57318 |
- |
PL328 |
Unspecified |
| scaffold11269 |
57363 |
57401 |
+ |
(TA)n |
Simple_repeat |
| scaffold11269 |
58125 |
58307 |
- |
RS4647 |
Unspecified |
| scaffold11269 |
58296 |
58520 |
- |
RS10181 |
Unspecified |
| scaffold11269 |
58540 |
58727 |
+ |
RS1013 |
Unspecified |
| scaffold11269 |
58722 |
59306 |
+ |
RS1013 |
Unspecified |
| scaffold11269 |
58792 |
59715 |
+ |
RS700 |
Unspecified |