scaffold11434 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11434 |
25 |
279 |
- |
RS4869 |
Unspecified |
| scaffold11434 |
2228 |
3099 |
- |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold11434 |
3660 |
4275 |
+ |
RS1210 |
Unspecified |
| scaffold11434 |
4167 |
4913 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold11434 |
4877 |
4913 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold11434 |
4914 |
4954 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold11434 |
5643 |
5958 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold11434 |
6823 |
7357 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold11434 |
8262 |
8326 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold11434 |
8354 |
8397 |
+ |
A-rich |
Low_complexity |
| scaffold11434 |
8443 |
8586 |
- |
RS756 |
Unspecified |
| scaffold11434 |
8639 |
9601 |
- |
PL475 |
Unspecified |
| scaffold11434 |
10384 |
10583 |
- |
PL60 |
Unspecified |
| scaffold11434 |
10865 |
10898 |
+ |
(TCTTTC)n |
Simple_repeat |
| scaffold11434 |
10934 |
11008 |
- |
GmOgre_I-int |
LTR/Gypsy |
| scaffold11434 |
12122 |
12145 |
+ |
(C)n |
Simple_repeat |
| scaffold11434 |
12190 |
12233 |
- |
Gypsy-32_Mad-I |
LTR/Gypsy |
| scaffold11434 |
12820 |
12889 |
+ |
A-rich |
Low_complexity |
| scaffold11434 |
13138 |
13183 |
+ |
(AATA)n |
Simple_repeat |
| scaffold11434 |
18172 |
18216 |
+ |
(TCGTAT)n |
Simple_repeat |
| scaffold11434 |
18994 |
19780 |
+ |
RS95 |
Unspecified |
| scaffold11434 |
19815 |
19870 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold11434 |
19875 |
20011 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11434 |
23107 |
23286 |
+ |
(CCG)n |
Simple_repeat |
| scaffold11434 |
23287 |
23312 |
- |
L1-6_CR |
LINE/L1 |
| scaffold11434 |
25143 |
25178 |
+ |
A-rich |
Low_complexity |
| scaffold11434 |
27143 |
27395 |
- |
PL449 |
Unspecified |
| scaffold11434 |
29843 |
29904 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold11434 |
29981 |
30126 |
- |
PL439 |
Unspecified |
| scaffold11434 |
30295 |
30347 |
+ |
(TTC)n |
Simple_repeat |
| scaffold11434 |
30295 |
30979 |
+ |
(TTC)n |
Simple_repeat |
| scaffold11434 |
30340 |
30979 |
+ |
PL439 |
Unspecified |
| scaffold11434 |
31201 |
31248 |
+ |
(TATA)n |
Simple_repeat |
| scaffold11434 |
31511 |
31546 |
+ |
(TTG)n |
Simple_repeat |
| scaffold11434 |
33220 |
33420 |
+ |
RS11427 |
Unspecified |
| scaffold11434 |
33499 |
33719 |
+ |
RS8975 |
Unspecified |
| scaffold11434 |
34328 |
34352 |
+ |
(A)n |
Simple_repeat |
| scaffold11434 |
34381 |
34415 |
+ |
(T)n |
Simple_repeat |
| scaffold11434 |
34851 |
34899 |
+ |
A-rich |
Low_complexity |
| scaffold11434 |
34886 |
34945 |
+ |
(ATGAAG)n |
Simple_repeat |
| scaffold11434 |
35315 |
35344 |
+ |
A-rich |
Low_complexity |
| scaffold11434 |
35402 |
35813 |
+ |
RS11820 |
Unspecified |
| scaffold11434 |
35949 |
36210 |
- |
RS26 |
Unspecified |
| scaffold11434 |
36897 |
36931 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold11434 |
37527 |
37571 |
+ |
A-rich |
Low_complexity |
| scaffold11434 |
37934 |
38851 |
- |
PL129 |
Unspecified |
| scaffold11434 |
38921 |
38991 |
+ |
(TTGATTA)n |
Simple_repeat |
| scaffold11434 |
39421 |
39493 |
+ |
(TTA)n |
Simple_repeat |
| scaffold11434 |
39717 |
39730 |
+ |
(TAGTT)n |
Simple_repeat |
| scaffold11434 |
39731 |
39770 |
+ |
(TAGTTT)n |
Simple_repeat |
| scaffold11434 |
39771 |
39782 |
+ |
(TAGTT)n |
Simple_repeat |
| scaffold11434 |
40362 |
40413 |
+ |
(TGA)n |
Simple_repeat |
| scaffold11434 |
40492 |
40542 |
+ |
GA-rich |
Low_complexity |
| scaffold11434 |
40875 |
40948 |
+ |
Alfare1_I-int |
LTR/Copia? |
| scaffold11434 |
40884 |
40977 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold11434 |
41452 |
41485 |
+ |
(ACC)n |
Simple_repeat |
| scaffold11434 |
42415 |
42470 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold11434 |
42507 |
42551 |
+ |
A-rich |
Low_complexity |
| scaffold11434 |
43229 |
43293 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold11434 |
43417 |
43438 |
+ |
(T)n |
Simple_repeat |
| scaffold11434 |
43778 |
43849 |
+ |
(TTGATTA)n |
Simple_repeat |
| scaffold11434 |
44243 |
44276 |
+ |
(CAGGA)n |
Simple_repeat |
| scaffold11434 |
44495 |
44532 |
+ |
(TCAACAC)n |
Simple_repeat |
| scaffold11434 |
44654 |
44745 |
+ |
SHACOP15_LTR_MT |
LTR/Copia |
| scaffold11434 |
47115 |
47545 |
+ |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold11434 |
47551 |
47732 |
+ |
RS369 |
Unspecified |
| scaffold11434 |
47988 |
48120 |
+ |
PL787 |
Unspecified |
| scaffold11434 |
48116 |
48193 |
- |
RS169 |
Unspecified |
| scaffold11434 |
48150 |
48530 |
- |
RS169 |
Unspecified |
| scaffold11434 |
48531 |
49019 |
- |
PL670 |
Unspecified |
| scaffold11434 |
48978 |
49633 |
+ |
PL933 |
Unspecified |
| scaffold11434 |
53938 |
54041 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold11434 |
54499 |
54958 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold11434 |
59094 |
59197 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |