scaffold11631 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11631 |
1 |
103 |
+ |
PL926 |
Unspecified |
| scaffold11631 |
103 |
710 |
- |
RS12612 |
Unspecified |
| scaffold11631 |
1203 |
1424 |
+ |
RS934 |
Unspecified |
| scaffold11631 |
3239 |
3286 |
+ |
(AGTGCTT)n |
Simple_repeat |
| scaffold11631 |
6063 |
6695 |
- |
RS3897 |
Unspecified |
| scaffold11631 |
6657 |
7484 |
- |
RS1096 |
Unspecified |
| scaffold11631 |
8788 |
9009 |
- |
PL192 |
Unspecified |
| scaffold11631 |
9503 |
9557 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold11631 |
9549 |
9617 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold11631 |
9679 |
10722 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold11631 |
10958 |
13567 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold11631 |
11169 |
12810 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold11631 |
12779 |
12823 |
- |
Gypsy-14_SMo-I |
LTR/Gypsy |
| scaffold11631 |
14277 |
14356 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold11631 |
15531 |
16928 |
- |
RS1496 |
Unspecified |
| scaffold11631 |
15973 |
18042 |
+ |
RS934 |
Unspecified |
| scaffold11631 |
18066 |
18692 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold11631 |
19974 |
20096 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11631 |
20394 |
20621 |
- |
RS11147 |
Unspecified |
| scaffold11631 |
20777 |
20809 |
+ |
(T)n |
Simple_repeat |
| scaffold11631 |
21137 |
21176 |
+ |
(ATT)n |
Simple_repeat |
| scaffold11631 |
21192 |
21270 |
+ |
RS8 |
Unspecified |
| scaffold11631 |
21311 |
21882 |
+ |
PL214 |
Unspecified |
| scaffold11631 |
22430 |
22749 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold11631 |
22714 |
22749 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold11631 |
25034 |
25062 |
+ |
(CAC)n |
Simple_repeat |
| scaffold11631 |
27761 |
27790 |
+ |
(T)n |
Simple_repeat |
| scaffold11631 |
27966 |
28392 |
+ |
PL580 |
Unspecified |
| scaffold11631 |
28412 |
28457 |
+ |
(T)n |
Simple_repeat |
| scaffold11631 |
28621 |
28779 |
+ |
A-rich |
Low_complexity |
| scaffold11631 |
28933 |
29320 |
- |
RS1541 |
Unspecified |
| scaffold11631 |
30233 |
30625 |
+ |
PL533 |
Unspecified |
| scaffold11631 |
30623 |
30653 |
+ |
(A)n |
Simple_repeat |
| scaffold11631 |
30968 |
31192 |
+ |
RS5936 |
Unspecified |
| scaffold11631 |
31417 |
31740 |
+ |
RS7692 |
Unspecified |
| scaffold11631 |
31599 |
31816 |
+ |
RS7167 |
Unspecified |
| scaffold11631 |
33525 |
33557 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold11631 |
35450 |
35476 |
+ |
(CAAAA)n |
Simple_repeat |
| scaffold11631 |
35450 |
36373 |
+ |
(CAAAA)n |
Simple_repeat |
| scaffold11631 |
35465 |
36373 |
- |
PL196 |
Unspecified |
| scaffold11631 |
36544 |
36592 |
+ |
A-rich |
Low_complexity |
| scaffold11631 |
36958 |
37032 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11631 |
37853 |
38039 |
+ |
RS10295 |
Unspecified |
| scaffold11631 |
38819 |
39160 |
- |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold11631 |
39190 |
39393 |
- |
RS890 |
Unspecified |
| scaffold11631 |
39421 |
39630 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold11631 |
39738 |
40201 |
- |
RS9711 |
Unspecified |
| scaffold11631 |
40474 |
41408 |
- |
RS1367 |
Unspecified |
| scaffold11631 |
41184 |
41728 |
- |
RS3121 |
Unspecified |
| scaffold11631 |
41331 |
42142 |
+ |
RS2174 |
Unspecified |
| scaffold11631 |
41436 |
42398 |
+ |
RS1274 |
Unspecified |
| scaffold11631 |
42427 |
42476 |
+ |
(TT)n |
Simple_repeat |
| scaffold11631 |
42427 |
42728 |
+ |
(TT)n |
Simple_repeat |
| scaffold11631 |
42461 |
42728 |
+ |
RS4909 |
Unspecified |
| scaffold11631 |
42580 |
42756 |
+ |
RS18030 |
Unspecified |
| scaffold11631 |
43014 |
44228 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold11631 |
43038 |
44217 |
- |
Copia-71_ZM-I |
LTR/Copia |
| scaffold11631 |
44213 |
44508 |
+ |
PL9 |
Unspecified |
| scaffold11631 |
44481 |
44944 |
- |
Copia-71_ZM-I |
LTR/Copia |
| scaffold11631 |
45004 |
45043 |
+ |
(TTCTGTGC)n |
Simple_repeat |
| scaffold11631 |
45407 |
46193 |
- |
Copia-71_ZM-I |
LTR/Copia |
| scaffold11631 |
46442 |
46794 |
- |
COPIA-I_MT |
LTR/Copia |
| scaffold11631 |
46877 |
47575 |
+ |
(TTCAGTT)n |
Simple_repeat |
| scaffold11631 |
47538 |
47575 |
+ |
(TTCAGTT)n |
Simple_repeat |
| scaffold11631 |
48268 |
48374 |
- |
COPIA-I_MT |
LTR/Copia |
| scaffold11631 |
48433 |
48625 |
- |
Copia-71_ZM-I |
LTR/Copia |
| scaffold11631 |
48957 |
48997 |
- |
Copia-36_BD-I |
LTR/Copia |
| scaffold11631 |
49209 |
49257 |
+ |
A-rich |
Low_complexity |
| scaffold11631 |
49697 |
50241 |
- |
RS3121 |
Unspecified |
| scaffold11631 |
50912 |
51171 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold11631 |
51915 |
51982 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold11631 |
52247 |
52298 |
+ |
(TTAGTC)n |
Simple_repeat |
| scaffold11631 |
52636 |
52664 |
+ |
(CTCGAG)n |
Simple_repeat |
| scaffold11631 |
55039 |
55100 |
+ |
(T)n |
Simple_repeat |
| scaffold11631 |
55807 |
55865 |
+ |
A-rich |
Low_complexity |
| scaffold11631 |
56092 |
56146 |
+ |
(CAT)n |
Simple_repeat |
| scaffold11631 |
56340 |
57008 |
- |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold11631 |
57065 |
57106 |
+ |
(CTTCTC)n |
Simple_repeat |
| scaffold11631 |
57192 |
57679 |
+ |
RS1706 |
Unspecified |
| scaffold11631 |
58838 |
59835 |
+ |
RS101 |
Unspecified |
| scaffold11631 |
59838 |
60046 |
+ |
RS756 |
Unspecified |
| scaffold11631 |
60047 |
60442 |
- |
RS3795 |
Unspecified |
| scaffold11631 |
60443 |
60486 |
+ |
PL831 |
Unspecified |
| scaffold11631 |
60487 |
60584 |
+ |
PL643 |
Unspecified |
| scaffold11631 |
62875 |
63031 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold11631 |
63678 |
64152 |
+ |
RS3005 |
Unspecified |
| scaffold11631 |
64278 |
64710 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold11631 |
65379 |
65456 |
+ |
(ATGATG)n |
Simple_repeat |