scaffold11652 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11652 |
916 |
972 |
+ |
(GGTCAA)n |
Simple_repeat |
| scaffold11652 |
1331 |
1445 |
+ |
COPI1_LTR |
LTR/Copia |
| scaffold11652 |
3068 |
3571 |
- |
RS273 |
Unspecified |
| scaffold11652 |
3779 |
3858 |
+ |
Gypsy-11_Pru-I |
LTR/Gypsy |
| scaffold11652 |
4147 |
4343 |
- |
RS273 |
Unspecified |
| scaffold11652 |
4534 |
4630 |
+ |
Gypsy-11_Pru-I |
LTR/Gypsy |
| scaffold11652 |
4883 |
6274 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold11652 |
6403 |
6588 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold11652 |
6842 |
8015 |
+ |
Gypsy16-VV_I-int |
LTR/Gypsy |
| scaffold11652 |
9408 |
9436 |
+ |
(TCT)n |
Simple_repeat |
| scaffold11652 |
11154 |
11210 |
+ |
(GGTCAA)n |
Simple_repeat |
| scaffold11652 |
11563 |
11681 |
+ |
Copia-88_ST-LTR |
LTR/Copia |
| scaffold11652 |
12068 |
12113 |
+ |
(AATTAAGG)n |
Simple_repeat |
| scaffold11652 |
12378 |
12475 |
+ |
G-rich |
Low_complexity |
| scaffold11652 |
13096 |
13135 |
+ |
(ACGAAAC)n |
Simple_repeat |
| scaffold11652 |
13219 |
14535 |
+ |
RS443 |
Unspecified |
| scaffold11652 |
13574 |
13607 |
+ |
(CTT)n |
Simple_repeat |
| scaffold11652 |
14838 |
16337 |
+ |
RS3148 |
Unspecified |
| scaffold11652 |
17099 |
17183 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold11652 |
17350 |
17642 |
+ |
RS11094 |
Unspecified |
| scaffold11652 |
18182 |
18293 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold11652 |
18408 |
18447 |
+ |
(CTTTGA)n |
Simple_repeat |
| scaffold11652 |
19323 |
21144 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold11652 |
21427 |
22491 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold11652 |
22691 |
22834 |
- |
PL743 |
Unspecified |
| scaffold11652 |
24139 |
24429 |
- |
PL743 |
Unspecified |
| scaffold11652 |
24302 |
24725 |
+ |
PL903 |
Unspecified |
| scaffold11652 |
24793 |
24844 |
+ |
(TCA)n |
Simple_repeat |
| scaffold11652 |
25237 |
25662 |
+ |
RS616 |
Unspecified |
| scaffold11652 |
27371 |
27409 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold11652 |
27613 |
27661 |
+ |
(AACC)n |
Simple_repeat |
| scaffold11652 |
27979 |
28027 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold11652 |
28258 |
28294 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold11652 |
28509 |
28587 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold11652 |
28978 |
29466 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold11652 |
29513 |
29716 |
- |
RS6781 |
Unspecified |
| scaffold11652 |
30584 |
30756 |
- |
ATHILA-2_SBi-I |
LTR/Gypsy |
| scaffold11652 |
31386 |
31431 |
- |
ATHILA-2_SBi-I |
LTR/Gypsy |
| scaffold11652 |
32190 |
32248 |
+ |
(AACATAA)n |
Simple_repeat |
| scaffold11652 |
32326 |
32365 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold11652 |
32917 |
32961 |
+ |
(TTCTG)n |
Simple_repeat |
| scaffold11652 |
34273 |
34693 |
- |
PL844 |
Unspecified |
| scaffold11652 |
34839 |
34899 |
+ |
(AATTTCA)n |
Simple_repeat |
| scaffold11652 |
35654 |
35690 |
+ |
(ATA)n |
Simple_repeat |
| scaffold11652 |
35759 |
35796 |
+ |
(TATGT)n |
Simple_repeat |
| scaffold11652 |
36027 |
36092 |
+ |
(GATGTT)n |
Simple_repeat |
| scaffold11652 |
39108 |
39155 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold11652 |
39398 |
39447 |
+ |
A-rich |
Low_complexity |
| scaffold11652 |
39483 |
39539 |
+ |
A-rich |
Low_complexity |
| scaffold11652 |
39651 |
39690 |
+ |
A-rich |
Low_complexity |