scaffold1179 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1179 |
92 |
158 |
+ |
(TCG)n |
Simple_repeat |
| scaffold1179 |
1250 |
1279 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
2358 |
2391 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
2771 |
2797 |
+ |
(TGTCGT)n |
Simple_repeat |
| scaffold1179 |
4862 |
4894 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1179 |
8357 |
8813 |
- |
RS35 |
Unspecified |
| scaffold1179 |
10270 |
10665 |
+ |
PL576 |
Unspecified |
| scaffold1179 |
13015 |
13067 |
+ |
A-rich |
Low_complexity |
| scaffold1179 |
13823 |
13853 |
+ |
A-rich |
Low_complexity |
| scaffold1179 |
16401 |
16429 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold1179 |
16556 |
16598 |
+ |
A-rich |
Low_complexity |
| scaffold1179 |
17135 |
17175 |
+ |
(GGT)n |
Simple_repeat |
| scaffold1179 |
17263 |
17297 |
+ |
(GTGGAGT)n |
Simple_repeat |
| scaffold1179 |
17296 |
17326 |
+ |
(TGGTTT)n |
Simple_repeat |
| scaffold1179 |
17351 |
17608 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1179 |
17712 |
17767 |
+ |
RS365 |
Unspecified |
| scaffold1179 |
18532 |
18581 |
+ |
(TGG)n |
Simple_repeat |
| scaffold1179 |
18790 |
18866 |
+ |
A-rich |
Low_complexity |
| scaffold1179 |
19118 |
19142 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
19143 |
19154 |
+ |
(TTTTGT)n |
Simple_repeat |
| scaffold1179 |
19170 |
19255 |
- |
RS7678 |
Unspecified |
| scaffold1179 |
19303 |
19732 |
- |
PL352 |
Unspecified |
| scaffold1179 |
20395 |
20437 |
+ |
(TTTAGGG)n |
Simple_repeat |
| scaffold1179 |
20835 |
20854 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
24980 |
25022 |
+ |
(TG)n |
Simple_repeat |
| scaffold1179 |
25081 |
25218 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold1179 |
25222 |
25277 |
+ |
RS10 |
Unspecified |
| scaffold1179 |
25365 |
25448 |
+ |
RS18 |
Unspecified |
| scaffold1179 |
25478 |
25519 |
- |
RS17877 |
Unspecified |
| scaffold1179 |
25483 |
25607 |
- |
RS894 |
Unspecified |
| scaffold1179 |
25608 |
25770 |
- |
RS894 |
Unspecified |
| scaffold1179 |
25785 |
25951 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold1179 |
25923 |
25951 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold1179 |
25923 |
26473 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold1179 |
25940 |
26473 |
- |
PL788 |
Unspecified |
| scaffold1179 |
26491 |
26798 |
+ |
RS466 |
Unspecified |
| scaffold1179 |
26797 |
27053 |
+ |
RS3535 |
Unspecified |
| scaffold1179 |
27050 |
27422 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1179 |
27263 |
27422 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1179 |
27423 |
27468 |
+ |
(TATTGT)n |
Simple_repeat |
| scaffold1179 |
27469 |
27649 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1179 |
28014 |
28036 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
28041 |
28367 |
- |
RS656 |
Unspecified |
| scaffold1179 |
28362 |
28460 |
+ |
RS4 |
Unspecified |
| scaffold1179 |
28414 |
28473 |
- |
RS17822 |
Unspecified |
| scaffold1179 |
29342 |
29379 |
+ |
(A)n |
Simple_repeat |
| scaffold1179 |
29406 |
29450 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold1179 |
29723 |
30101 |
+ |
RS9496 |
Unspecified |
| scaffold1179 |
30641 |
31356 |
+ |
PL721 |
Unspecified |
| scaffold1179 |
31344 |
31921 |
- |
PL469 |
Unspecified |
| scaffold1179 |
31923 |
31966 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
32306 |
32368 |
+ |
A-rich |
Low_complexity |
| scaffold1179 |
32879 |
32909 |
+ |
(TA)n |
Simple_repeat |
| scaffold1179 |
32879 |
32958 |
+ |
(TA)n |
Simple_repeat |
| scaffold1179 |
32897 |
32958 |
- |
RS84 |
Unspecified |
| scaffold1179 |
44155 |
44190 |
- |
Copia-53_BRa-I |
LTR/Copia |
| scaffold1179 |
46274 |
46324 |
- |
RS41 |
Unspecified |
| scaffold1179 |
46356 |
46426 |
- |
SINE2-1_STu |
SINE/tRNA |
| scaffold1179 |
46946 |
46984 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold1179 |
47940 |
48896 |
- |
ATIS112A |
DNA/PIF-Harbinger |
| scaffold1179 |
49172 |
49188 |
+ |
(A)n |
Simple_repeat |
| scaffold1179 |
49345 |
50080 |
- |
RS1223 |
Unspecified |
| scaffold1179 |
50844 |
51028 |
+ |
PL134 |
Unspecified |
| scaffold1179 |
51017 |
51525 |
- |
PL6 |
Unspecified |
| scaffold1179 |
51509 |
51710 |
+ |
PL134 |
Unspecified |
| scaffold1179 |
51807 |
51985 |
- |
RS4898 |
Unspecified |
| scaffold1179 |
51836 |
52023 |
- |
RS12702 |
Unspecified |
| scaffold1179 |
52241 |
52278 |
+ |
A-rich |
Low_complexity |
| scaffold1179 |
52276 |
52405 |
- |
RS7839 |
Unspecified |
| scaffold1179 |
52449 |
52493 |
+ |
A-rich |
Low_complexity |
| scaffold1179 |
52449 |
52662 |
+ |
A-rich |
Low_complexity |
| scaffold1179 |
52472 |
52662 |
- |
RS13346 |
Unspecified |
| scaffold1179 |
52830 |
52917 |
+ |
RS14195 |
Unspecified |
| scaffold1179 |
53094 |
53175 |
+ |
(ATTATTA)n |
Simple_repeat |
| scaffold1179 |
53289 |
53316 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold1179 |
56580 |
56621 |
+ |
(A)n |
Simple_repeat |
| scaffold1179 |
57797 |
57820 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
58017 |
58083 |
+ |
PL517 |
Unspecified |
| scaffold1179 |
58097 |
58120 |
+ |
(A)n |
Simple_repeat |
| scaffold1179 |
58185 |
58205 |
+ |
(A)n |
Simple_repeat |
| scaffold1179 |
58204 |
58477 |
- |
RS106 |
Unspecified |
| scaffold1179 |
58988 |
59024 |
+ |
(TATATT)n |
Simple_repeat |
| scaffold1179 |
59430 |
59469 |
+ |
(TTATATA)n |
Simple_repeat |
| scaffold1179 |
60990 |
61204 |
+ |
RS1526 |
Unspecified |
| scaffold1179 |
61078 |
61231 |
+ |
RS2535 |
Unspecified |
| scaffold1179 |
61276 |
61305 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
61397 |
61530 |
- |
RS16055 |
Unspecified |
| scaffold1179 |
61639 |
61713 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold1179 |
61822 |
61894 |
+ |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold1179 |
62109 |
62140 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
64203 |
64213 |
+ |
(ATTTTGA)n |
Simple_repeat |
| scaffold1179 |
64214 |
64259 |
+ |
(TTTGAA)n |
Simple_repeat |
| scaffold1179 |
64310 |
64546 |
- |
RS41 |
Unspecified |
| scaffold1179 |
64970 |
65000 |
+ |
(AAATCC)n |
Simple_repeat |
| scaffold1179 |
65464 |
65503 |
+ |
A-rich |
Low_complexity |
| scaffold1179 |
65964 |
65993 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1179 |
66108 |
66148 |
- |
RS10247 |
Unspecified |
| scaffold1179 |
66372 |
66390 |
+ |
(A)n |
Simple_repeat |
| scaffold1179 |
66619 |
66652 |
- |
RS7711 |
Unspecified |
| scaffold1179 |
66684 |
66751 |
+ |
(ATTTTTT)n |
Simple_repeat |
| scaffold1179 |
66980 |
67014 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold1179 |
67093 |
67347 |
+ |
RS1 |
Unspecified |
| scaffold1179 |
68636 |
68681 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
69056 |
69108 |
- |
VLINE9_VV |
LINE/L1 |
| scaffold1179 |
69820 |
70983 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold1179 |
70002 |
70761 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold1179 |
71618 |
71637 |
+ |
(AG)n |
Simple_repeat |
| scaffold1179 |
71658 |
71790 |
- |
RS34 |
Unspecified |
| scaffold1179 |
71850 |
71948 |
+ |
Gypsy-125_SBi-I |
LTR/Gypsy |
| scaffold1179 |
72993 |
73018 |
+ |
(T)n |
Simple_repeat |
| scaffold1179 |
73948 |
74262 |
- |
RS726 |
Unspecified |
| scaffold1179 |
74673 |
74797 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold1179 |
74838 |
74868 |
- |
SHAMUDRAV_MT |
DNA/MULE-MuDR |
| scaffold1179 |
74869 |
74954 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1179 |
74955 |
74975 |
- |
SHAMUDRAV_MT |
DNA/MULE-MuDR |
| scaffold1179 |
75881 |
75915 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1179 |
76287 |
76378 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1179 |
76444 |
76573 |
+ |
RS1323 |
Unspecified |
| scaffold1179 |
76512 |
76603 |
+ |
RS1323 |
Unspecified |
| scaffold1179 |
76912 |
77024 |
+ |
RS606 |
Unspecified |
| scaffold1179 |
76919 |
77011 |
+ |
RS4475 |
Unspecified |
| scaffold1179 |
77267 |
77557 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold1179 |
78275 |
78882 |
+ |
PL459 |
Unspecified |
| scaffold1179 |
79053 |
79359 |
+ |
RS1354 |
Unspecified |
| scaffold1179 |
79177 |
79483 |
- |
RS228 |
Unspecified |
| scaffold1179 |
79361 |
79524 |
+ |
RS498 |
Unspecified |
| scaffold1179 |
80341 |
80736 |
+ |
PL834 |
Unspecified |
| scaffold1179 |
80736 |
80799 |
+ |
PL169 |
Unspecified |
| scaffold1179 |
81623 |
81737 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold1179 |
81865 |
81871 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold1179 |
81872 |
81938 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold1179 |
81939 |
81948 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold1179 |
82128 |
82223 |
+ |
RS11715 |
Unspecified |
| scaffold1179 |
82713 |
82817 |
- |
RS13740 |
Unspecified |
| scaffold1179 |
84125 |
84157 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold1179 |
84484 |
84591 |
+ |
RS3427 |
Unspecified |
| scaffold1179 |
85238 |
85308 |
+ |
PL169 |
Unspecified |