scaffold11841 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11841 |
1 |
118 |
+ |
PL466 |
Unspecified |
| scaffold11841 |
87 |
129 |
- |
PL543 |
Unspecified |
| scaffold11841 |
4351 |
4380 |
+ |
(GATT)n |
Simple_repeat |
| scaffold11841 |
4609 |
4645 |
+ |
(T)n |
Simple_repeat |
| scaffold11841 |
6552 |
7181 |
- |
RS869 |
Unspecified |
| scaffold11841 |
8081 |
8180 |
- |
RS1 |
Unspecified |
| scaffold11841 |
8083 |
8197 |
+ |
RS15138 |
Unspecified |
| scaffold11841 |
8230 |
8294 |
+ |
RS13832 |
Unspecified |
| scaffold11841 |
8351 |
8379 |
+ |
A-rich |
Low_complexity |
| scaffold11841 |
8398 |
8426 |
+ |
(A)n |
Simple_repeat |
| scaffold11841 |
11206 |
11234 |
+ |
A-rich |
Low_complexity |
| scaffold11841 |
11767 |
11905 |
+ |
(CAC)n |
Simple_repeat |
| scaffold11841 |
12629 |
12703 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold11841 |
13746 |
13928 |
- |
RS1347 |
Unspecified |
| scaffold11841 |
18106 |
18130 |
+ |
(TA)n |
Simple_repeat |
| scaffold11841 |
19117 |
19367 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold11841 |
19865 |
19905 |
+ |
A-rich |
Low_complexity |
| scaffold11841 |
20018 |
20042 |
+ |
(GTT)n |
Simple_repeat |
| scaffold11841 |
20430 |
20469 |
+ |
(T)n |
Simple_repeat |
| scaffold11841 |
22387 |
22621 |
+ |
PL582 |
Unspecified |
| scaffold11841 |
22617 |
22791 |
- |
PL2 |
Unspecified |
| scaffold11841 |
22759 |
22795 |
- |
PL271 |
Unspecified |
| scaffold11841 |
23255 |
23476 |
+ |
(CGAGCT)n |
Simple_repeat |
| scaffold11841 |
23422 |
23476 |
+ |
(CGAGCT)n |
Simple_repeat |
| scaffold11841 |
23501 |
23549 |
+ |
A-rich |
Low_complexity |
| scaffold11841 |
23550 |
23566 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold11841 |
23622 |
23683 |
- |
RS2157 |
Unspecified |
| scaffold11841 |
23684 |
23836 |
- |
RS15302 |
Unspecified |
| scaffold11841 |
24012 |
24040 |
+ |
(AGA)n |
Simple_repeat |
| scaffold11841 |
24087 |
24308 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold11841 |
25032 |
26094 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold11841 |
26778 |
27251 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold11841 |
26778 |
27656 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold11841 |
27122 |
27656 |
+ |
RS7988 |
Unspecified |
| scaffold11841 |
27714 |
28056 |
+ |
RS8919 |
Unspecified |
| scaffold11841 |
28484 |
31839 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold11841 |
31975 |
32082 |
+ |
RS5673 |
Unspecified |
| scaffold11841 |
32125 |
32243 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold11841 |
32296 |
32368 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold11841 |
32427 |
32798 |
+ |
RS7375 |
Unspecified |
| scaffold11841 |
32619 |
33099 |
+ |
RS9630 |
Unspecified |
| scaffold11841 |
32968 |
33155 |
+ |
RS10717 |
Unspecified |
| scaffold11841 |
34233 |
34413 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold11841 |
35528 |
35573 |
+ |
(TA)n |
Simple_repeat |
| scaffold11841 |
35712 |
35756 |
+ |
A-rich |
Low_complexity |
| scaffold11841 |
36759 |
36902 |
- |
RS15302 |
Unspecified |
| scaffold11841 |
36781 |
36965 |
+ |
RS243 |
Unspecified |
| scaffold11841 |
36888 |
37162 |
+ |
RS243 |
Unspecified |
| scaffold11841 |
37476 |
37509 |
+ |
(AGA)n |
Simple_repeat |
| scaffold11841 |
37667 |
37879 |
- |
RS2157 |
Unspecified |
| scaffold11841 |
38414 |
38589 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold11841 |
39084 |
39145 |
- |
RS14970 |
Unspecified |
| scaffold11841 |
39102 |
39195 |
- |
RS16382 |
Unspecified |
| scaffold11841 |
39803 |
39829 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold11841 |
40421 |
40503 |
- |
RS12885 |
Unspecified |
| scaffold11841 |
40432 |
40526 |
+ |
RS16382 |
Unspecified |
| scaffold11841 |
40438 |
40537 |
+ |
PL436 |
Unspecified |
| scaffold11841 |
41097 |
41120 |
+ |
(A)n |
Simple_repeat |
| scaffold11841 |
41321 |
41374 |
+ |
(CAC)n |
Simple_repeat |
| scaffold11841 |
41481 |
41517 |
+ |
(CCCCAC)n |
Simple_repeat |
| scaffold11841 |
41555 |
41581 |
+ |
(CCG)n |
Simple_repeat |
| scaffold11841 |
42090 |
42277 |
+ |
RS14408 |
Unspecified |
| scaffold11841 |
42407 |
42430 |
+ |
(CCG)n |
Simple_repeat |
| scaffold11841 |
42921 |
42996 |
+ |
(CTCCAC)n |
Simple_repeat |
| scaffold11841 |
44627 |
44805 |
+ |
RS17744 |
Unspecified |
| scaffold11841 |
49542 |
49584 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold11841 |
50685 |
50709 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold11841 |
51200 |
51616 |
+ |
PL226 |
Unspecified |
| scaffold11841 |
52600 |
52675 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold11841 |
53041 |
53076 |
+ |
Gypsy-44_Mad-I |
LTR/Gypsy |
| scaffold11841 |
53164 |
53188 |
+ |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold11841 |
53189 |
53265 |
- |
Gypsy2-I_MT |
LTR/Gypsy |
| scaffold11841 |
54128 |
54176 |
+ |
(ATTATAA)n |
Simple_repeat |
| scaffold11841 |
54689 |
55758 |
- |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold11841 |
57261 |
57315 |
- |
Gypsy-199_ZM-I |
LTR/Gypsy |
| scaffold11841 |
58171 |
58225 |
+ |
(ATTATAA)n |
Simple_repeat |
| scaffold11841 |
58556 |
58669 |
+ |
Gypsy-108_SB-I |
LTR/Gypsy |
| scaffold11841 |
58809 |
58897 |
- |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold11841 |
58999 |
59051 |
+ |
A-rich |
Low_complexity |
| scaffold11841 |
59256 |
59518 |
+ |
RS3487 |
Unspecified |
| scaffold11841 |
59515 |
59876 |
- |
PL139 |
Unspecified |
| scaffold11841 |
64973 |
65398 |
+ |
PL60 |
Unspecified |
| scaffold11841 |
65938 |
66082 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold11841 |
68179 |
68230 |
+ |
GA-rich |
Low_complexity |
| scaffold11841 |
71319 |
71337 |
+ |
(A)n |
Simple_repeat |
| scaffold11841 |
74523 |
74545 |
+ |
(AACA)n |
Simple_repeat |
| scaffold11841 |
74874 |
74921 |
+ |
(T)n |
Simple_repeat |
| scaffold11841 |
75030 |
75168 |
+ |
RS4 |
Unspecified |
| scaffold11841 |
75482 |
75668 |
- |
RS3698 |
Unspecified |
| scaffold11841 |
75709 |
75944 |
- |
RS5215 |
Unspecified |
| scaffold11841 |
77587 |
77634 |
- |
RAM9B_LTR |
LTR/Gypsy |
| scaffold11841 |
78144 |
78180 |
+ |
(ATCAACA)n |
Simple_repeat |
| scaffold11841 |
78563 |
78584 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold11841 |
79616 |
79651 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold11841 |
80442 |
80474 |
+ |
A-rich |
Low_complexity |
| scaffold11841 |
82537 |
83188 |
- |
RS488 |
Unspecified |
| scaffold11841 |
84866 |
84936 |
+ |
(GGTTTT)n |
Simple_repeat |
| scaffold11841 |
85619 |
85665 |
+ |
Athila8A_I-int |
LTR/Gypsy |
| scaffold11841 |
85901 |
86651 |
- |
PL21 |
Unspecified |