scaffold12105 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12105 |
1 |
26 |
+ |
(TA)n |
Simple_repeat |
| scaffold12105 |
606 |
645 |
+ |
(TATACG)n |
Simple_repeat |
| scaffold12105 |
737 |
757 |
+ |
(T)n |
Simple_repeat |
| scaffold12105 |
2600 |
3577 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold12105 |
2780 |
3562 |
- |
SHALINE10_MT |
LINE/L1 |
| scaffold12105 |
3578 |
3754 |
+ |
RS1933 |
Unspecified |
| scaffold12105 |
4295 |
4429 |
- |
RS1109 |
Unspecified |
| scaffold12105 |
4553 |
4812 |
+ |
RS11805 |
Unspecified |
| scaffold12105 |
5158 |
5179 |
+ |
(T)n |
Simple_repeat |
| scaffold12105 |
5333 |
5596 |
+ |
RS11805 |
Unspecified |
| scaffold12105 |
5707 |
6061 |
+ |
PL209 |
Unspecified |
| scaffold12105 |
6085 |
6200 |
+ |
RS14684 |
Unspecified |
| scaffold12105 |
6423 |
6446 |
+ |
(T)n |
Simple_repeat |
| scaffold12105 |
7415 |
7461 |
+ |
(ATA)n |
Simple_repeat |
| scaffold12105 |
7793 |
7907 |
+ |
RS13722 |
Unspecified |
| scaffold12105 |
7913 |
8156 |
+ |
RS13738 |
Unspecified |
| scaffold12105 |
8161 |
8236 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12105 |
8849 |
9065 |
+ |
Copia-66_GM-LTR |
LTR/Copia |
| scaffold12105 |
9166 |
9193 |
+ |
(T)n |
Simple_repeat |
| scaffold12105 |
9525 |
9580 |
+ |
RS622 |
Unspecified |
| scaffold12105 |
10484 |
10626 |
- |
RS4252 |
Unspecified |
| scaffold12105 |
10634 |
10719 |
+ |
RS622 |
Unspecified |
| scaffold12105 |
10796 |
10830 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold12105 |
10902 |
11221 |
+ |
RS96 |
Unspecified |
| scaffold12105 |
11428 |
11530 |
+ |
Copia-86_VV-I |
LTR/Copia |
| scaffold12105 |
11605 |
11822 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold12105 |
11787 |
11803 |
+ |
(A)n |
Simple_repeat |
| scaffold12105 |
11845 |
12487 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold12105 |
12489 |
12919 |
+ |
PL21 |
Unspecified |
| scaffold12105 |
12920 |
13210 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold12105 |
13426 |
13716 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold12105 |
13849 |
13892 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold12105 |
14042 |
14088 |
+ |
(TCGGT)n |
Simple_repeat |
| scaffold12105 |
14100 |
15283 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold12105 |
16090 |
16398 |
+ |
Copia17-VV_I-int |
LTR/Copia |
| scaffold12105 |
16412 |
16906 |
+ |
Copia-86_VV-I |
LTR/Copia |
| scaffold12105 |
16907 |
16965 |
+ |
Copia-86_VV-I |
LTR/Copia |
| scaffold12105 |
16967 |
17110 |
+ |
ENSPM-N3_VV |
DNA/CMC-EnSpm |
| scaffold12105 |
16990 |
17150 |
- |
EnSpm-5_Mad |
DNA/CMC-EnSpm |
| scaffold12105 |
17293 |
17679 |
- |
RS632 |
Unspecified |
| scaffold12105 |
17968 |
18026 |
+ |
A-rich |
Low_complexity |
| scaffold12105 |
18225 |
19114 |
+ |
RS2036 |
Unspecified |
| scaffold12105 |
19122 |
19330 |
+ |
RS3659 |
Unspecified |
| scaffold12105 |
19926 |
19978 |
+ |
A-rich |
Low_complexity |
| scaffold12105 |
20079 |
20194 |
+ |
(TCTTCC)n |
Simple_repeat |
| scaffold12105 |
20198 |
20342 |
+ |
RS5128 |
Unspecified |
| scaffold12105 |
20467 |
20565 |
+ |
EnSpm-43_SBi |
DNA/CMC-EnSpm |
| scaffold12105 |
20587 |
21063 |
+ |
(CAA)n |
Simple_repeat |
| scaffold12105 |
21875 |
21998 |
+ |
RS11786 |
Unspecified |
| scaffold12105 |
22241 |
23721 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold12105 |
23704 |
24233 |
- |
ENSUPMET |
DNA/CMC-EnSpm |
| scaffold12105 |
25144 |
25261 |
- |
EnSpm-13_VV |
DNA/CMC-EnSpm |
| scaffold12105 |
25547 |
25679 |
+ |
RS5128 |
Unspecified |
| scaffold12105 |
25786 |
25961 |
+ |
(AAC)n |
Simple_repeat |
| scaffold12105 |
27028 |
27213 |
- |
RS7538 |
Unspecified |
| scaffold12105 |
27109 |
27228 |
+ |
RS13342 |
Unspecified |
| scaffold12105 |
28494 |
28791 |
+ |
PL230 |
Unspecified |
| scaffold12105 |
28793 |
28933 |
- |
RS357 |
Unspecified |
| scaffold12105 |
30642 |
30975 |
- |
RS1064 |
Unspecified |
| scaffold12105 |
31382 |
31441 |
+ |
(CAAGCA)n |
Simple_repeat |
| scaffold12105 |
31466 |
32236 |
- |
RS658 |
Unspecified |